Alias: ACD4_87791.23155.13
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD4_26_1
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
2..688
|
purine or other phosphorylase family 1
seg (db=Seg db_id=seg from=16 to=30)
no description (db=Gene3D db_id=G3DSA:3.40.50.1580 from=19 to=224 evalue=8.8e-35)
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=28 to=213 evalue=1.2e-33)
|
|
ACD4_26_2
unknown
|
Not on your lists |
comp(698..1597)
|
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSE5_9BACT (db=UNIREF evalue=9.0e-34 bit_score=147.0 identity=33.55 coverage=98.3333333333333)
2-hydroxyacid dehydrogenase (db=KEGG evalue=3.0e-16 bit_score=89.4 identity=29.46 coverage=80.6666666666667)
seg (db=Seg db_id=seg from=138 to=151)
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996 from=1 to=292 evalue=7.2e-25)
|
(R)-lactate + acceptor >> pyruvate + reduced acceptor
specifically those acting on the CH-OH group of donor with other acceptors.
FAD is cofactor
kelly wrighton
(11/15/12)
|
ACD4_26_3
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(1911..2306)
|
1911..2306 - (rbs_motif=TTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD4
|
|
ACD4_26_4
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
2438..2809
|
coiled-coil (db=Coil db_id=coil from=50 to=78 evalue=NA)
seg (db=Seg db_id=seg from=49 to=77)
seg (db=Seg db_id=seg from=99 to=110)
seg 49..77 Tax=ACD4
|
|
ACD4_26_5
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
2829..3068
|
2829..3068 + (rbs_motif=TTAA rbs_spacer=7bp)
hypothetical protein Tax=ACD4
|
|
ACD4_26_6
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
3087..3761
|
seg (db=Seg db_id=seg from=137 to=158)
seg (db=Seg db_id=seg from=53 to=69)
coiled-coil (db=Coil db_id=coil from=197 to=218 evalue=NA)
coiled-coil 197..218 Tax=ACD4
|
|
ACD4_26_7
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
4288..5055
|
seg (db=Seg db_id=seg from=44 to=55)
seg (db=Seg db_id=seg from=187 to=198)
seg 44..55 Tax=ACD4
|
|
ACD4_26_8
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(5052..5600)
|
5052..5600 - (rbs_motif=TTAAT rbs_spacer=8bp)
hypothetical protein Tax=ACD4
|
|
ACD4_26_9
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(5610..7766)
|
Polyribonucleotide nucleotidyltransferase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=PNP_ALKOO (db=UNIREF evalue=1.0e-142 bit_score=510.0 identity=40.26 coverage=95.2712100139082)
polyribonucleotide nucleotidyltransferase
polyribonucleotide nucleotidyltransferase
seg (db=Seg db_id=seg from=260 to=275)
|
|
ACD4_26_10
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(8285..8893)
|
seg (db=Seg db_id=seg from=71 to=84)
seg (db=Seg db_id=seg from=7 to=13)
seg (db=Seg db_id=seg from=173 to=189)
Lysozyme-like (db=superfamily db_id=SSF53955 from=71 to=190 evalue=1.6e-10)
|
|
ACD4_26_11
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(9270..10724)
|
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
UPI0001D597C0 related cluster n=1 Tax=unknown RepID=UPI0001D597C0 (db=UNIREF evalue=7.0e-116 bit_score=421.0 identity=47.18 coverage=95.4639175257732)
seg (db=Seg db_id=seg from=140 to=153)
|
|
ACD4_26_12
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(10792..11916)
|
diguanylate cyclase
seg (db=Seg db_id=seg from=165 to=180)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=206 to=372 evalue=4.2e-39 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=192 to=370 evalue=4.2e-32)
|
|
ACD4_26_13
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(11988..12179)
|
11988..12179 - (rbs_motif=TAAT rbs_spacer=8bp)
hypothetical protein Tax=ACD4
|
|
ACD4_26_14
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
13567..13947
|
13567..13947 + (rbs_motif=TTAAT rbs_spacer=11bp)
hypothetical protein Tax=ACD4
|
|
ACD4_26_15
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(14161..15351)
|
cell division protein FtsZ
cell division protein FtsZ
Cell division protein ftsZ n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFT2_9FIRM (db=UNIREF evalue=3.0e-96 bit_score=355.0 identity=54.04 coverage=84.6347607052897)
seg (db=Seg db_id=seg from=100 to=114)
|
|
ACD4_26_16
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(15436..16677)
|
ftsA; cell division protein ftsA
seg (db=Seg db_id=seg from=265 to=279)
coiled-coil (db=Coil db_id=coil from=51 to=72 evalue=NA)
ftsA: cell division protein FtsA (db=HMMTigr db_id=TIGR01174 from=6 to=378 evalue=6.7e-68 interpro_id=IPR020823 interpro_description=Cell division protein family FtsA GO=Biological Process: cell cycle (GO:0007049))
|
|
ACD4_26_17
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
16987..17763
|
major facilitator transporter; K08151 MFS transporter, DHA1 family, tetracycline resistance protein (db=KEGG evalue=5.0e-19 bit_score=98.2 identity=33.33 coverage=54.8262548262548)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=150)
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176)
|
|
ACD4_26_18
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
17798..18226
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=133)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=46)
seg (db=Seg db_id=seg from=56 to=69)
|
|
ACD4_26_19
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
18236..19396
|
glycosyl transferase group 1
seg (db=Seg db_id=seg from=349 to=360)
seg (db=Seg db_id=seg from=98 to=107)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=380 evalue=2.0e-66)
|
|
ACD4_26_20
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
19417..20226
|
glycosyl transferase family protein
seg (db=Seg db_id=seg from=229 to=259)
transmembrane_regions (db=TMHMM db_id=tmhmm from=242 to=260)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=247 evalue=1.8e-62)
|
|
ACD4_26_21
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
20307..21605
|
trigger factor
seg (db=Seg db_id=seg from=305 to=316)
seg (db=Seg db_id=seg from=372 to=390)
seg (db=Seg db_id=seg from=104 to=139)
|
|
ACD4_26_22
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
comp(21636..22142)
|
seg (db=Seg db_id=seg from=141 to=156)
seg 141..156 Tax=ACD4
|
|
ACD4_26_23
ACD4, Gracilibacteria, Bacteria
|
Not on your lists |
22316..23191
|
seg (db=Seg db_id=seg from=198 to=209)
seg (db=Seg db_id=seg from=7 to=16)
seg 7..16 Tax=ACD4
|