Alias: ACD4_70793.14297.12
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD4_32_1
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(1..354)
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seg (db=Seg db_id=seg from=60 to=74)
seg 60..74 Tax=ACD4
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ACD4_32_2
unknown
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Not on your lists |
comp(1227..1688)
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Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IMF3_9CHRO (db=UNIREF evalue=3.0e-10 bit_score=67.8 identity=33.33 coverage=94.1558441558442)
seg (db=Seg db_id=seg from=111 to=120)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=110)
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ACD4_32_3
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(1746..2105)
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glyoxalase; K06996 (db=KEGG evalue=3.0e-18 bit_score=94.0 identity=38.21 coverage=95.0)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=118 evalue=2.8e-11)
Tax=ACD4
glyoxalase; K06996 alias=ACD2_408.5720.52_3,ACD2_408.5720.52G0003,ACD2_C00029G00003 id=34989 tax=ACD2 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=BD1-5 organism_desc=BD1-5
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ACD4_32_4
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(2123..2737)
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hypothetical protein
DUF162 (db=HMMPfam db_id=PF02589 from=101 to=197 evalue=5.4e-11 interpro_id=IPR003741 interpro_description=Lactate utilization protein B/C)
hypothetical protein Tax=ACD4
hypothetical protein alias=ACD3_435.39150.63G0036,ACD3_435.39150.63_36,ACD3_C00024G00036 id=50039 tax=ACD3 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=BD1-5 organism_desc=BD1-5
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ACD4_32_5
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
2953..5766
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S-layer domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D478_PAESJ (db=UNIREF evalue=1.0e-16 bit_score=93.2 identity=34.57 coverage=18.2302771855011)
S-layer protein
seg (db=Seg db_id=seg from=636 to=661)
|
Possible S-layer protein WITH blue copper domain!
Jill Banfield
(11/15/12)
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ACD4_32_6
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(5855..6508)
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ACD4_32_7
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
6703..8169
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=216 to=237 evalue=NA)
coiled-coil (db=Coil db_id=coil from=258 to=279 evalue=NA)
ATP-BINDING TRANSPORT PROTEIN-RELATED (db=HMMPanther db_id=PTHR19211 from=100 to=475 evalue=6.0e-55)
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ACD4_32_8
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
8299..8574
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excinuclease ABC subunit C domain-containing protein
seg (db=Seg db_id=seg from=62 to=81)
GIY-YIG (db=HMMPfam db_id=PF01541 from=5 to=76 evalue=9.2e-14 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=2 to=75 evalue=6.8e-13 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
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ACD4_32_9
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
8577..9164
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engB; ribosome biogenesis GTP-binding protein YsxC
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=31 to=194 evalue=5.7e-27)
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=26 to=159 evalue=1.0e-23)
GTP-BINDING PROTEIN ENGB-RELATED (db=HMMPanther db_id=PTHR11649:SF13 from=26 to=159 evalue=1.0e-23)
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ACD4_32_10
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(9406..9768)
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ACD4_32_11
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(10003..10521)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=15 to=33)
transmembrane_regions 13..32 Tax=ACD4
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ACD4_32_12
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(10540..11067)
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SUA5/YciO/YrdC/YwlC family protein; K07566 putative translation factor (db=KEGG evalue=9.0e-19 bit_score=95.9 identity=30.86 coverage=96.5909090909091)
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=2 to=163 evalue=2.2e-26 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
YrdC/RibB (db=superfamily db_id=SSF55821 from=2 to=166 evalue=3.2e-22 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
SUA5 (db=HMMPanther db_id=PTHR17490 from=2 to=166 evalue=5.9e-21)
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ACD4_32_13
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(11149..11550)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=8 to=20)
transmembrane_regions 7..26 Tax=ACD4
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ACD4_32_14
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
comp(11571..11918)
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11571..11918 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD4
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ACD4_32_15
ACD4, Gracilibacteria, Bacteria
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Not on your lists |
13687..13899
|
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ACD4_32_16
unknown
|
Not on your lists |
13995..14282
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Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGD8_9EURY (db=UNIREF evalue=3.0e-10 bit_score=67.4 identity=33.33 coverage=95.8333333333333)
DNA_binding_1 (db=HMMPfam db_id=PF01035 from=4 to=78 evalue=5.1e-09 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
Methylated DNA-protein cysteine methyltransferase, C-terminal domain (db=superfamily db_id=SSF46767 from=5 to=80 evalue=4.1e-08 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=2 to=85 evalue=4.3e-06 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
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