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ACD4_46

Alias: ACD4_60723.6722.14

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_46_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2..334)
DNA (333bp) protein (111aa)
seg (db=Seg db_id=seg from=54 to=66)
seg (db=Seg db_id=seg from=71 to=82)
seg 54..66 Tax=ACD4
ACD4_46_2

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1220..2005
DNA (786bp) protein (262aa)
hypothetical protein
EF-G C-terminal domain-like (db=superfamily db_id=SSF54980 from=58 to=172 evalue=3.0e-14 interpro_id=IPR009022 interpro_description=Elongation factor G/III/V)
no description (db=Gene3D db_id=G3DSA:3.30.70.240 from=58 to=146 evalue=4.2e-08 interpro_id=IPR000640 interpro_description=Translation elongation factor EFG/EF2, C-terminal GO=Molecular Function: GTP binding (GO:0005525))
EFG_C (db=HMMPfam db_id=PF00679 from=56 to=135 evalue=3.1e-07 interpro_id=IPR000640 interpro_description=Translation elongation factor EFG/EF2, C-terminal GO=Molecular Function: GTP binding (GO:0005525))
ACD4_46_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

2149..2301
DNA (153bp) protein (51aa)
2149..2301 + (rbs_motif=TTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD4
ACD4_46_4

Not on your lists

2356..2550
DNA (195bp) protein (65aa)
2356..2550 + (rbs_motif=TTAA rbs_spacer=15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE26485.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD4_46_5

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2614..3744
DNA (1131bp) protein (377aa)
sortase family protein
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB (db=UNIREF evalue=1.0e-12 bit_score=77.8 identity=32.54 coverage=42.7055702917772)
coiled-coil (db=Coil db_id=coil from=176 to=197 evalue=NA)
seg (db=Seg db_id=seg from=119 to=130)
ACD4_46_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

3751..4059
DNA (309bp) protein (103aa)
seg (db=Seg db_id=seg from=57 to=80)
seg (db=Seg db_id=seg from=30 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions 31..53 Tax=ACD4
ACD4_46_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4056..4736)
DNA (681bp) protein (227aa)
seg (db=Seg db_id=seg from=178 to=186)
seg (db=Seg db_id=seg from=146 to=158)
seg (db=Seg db_id=seg from=78 to=91)
seg (db=Seg db_id=seg from=39 to=57)
ACD4_46_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4964..5413)
DNA (450bp) protein (150aa)
rRNA large subunit m3Psi methyltransferase RlmH
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=148 evalue=4.6e-29)
SPOUT_MTase (db=HMMPfam db_id=PF02590 from=2 to=148 evalue=4.1e-23 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
no description (db=Gene3D db_id=G3DSA:3.40.1280.10 from=1 to=148 evalue=7.5e-20)
ACD4_46_9
ACD4, Gracilibacteria, Bacteria

Not on your lists

5507..6760
DNA (1254bp) protein (418aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=236 to=249)
seg (db=Seg db_id=seg from=136 to=157)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=120 evalue=7.3e-15)
Displaying 9 items

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