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ACD4_87

Alias: ACD4_14998.7207.12

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_87_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2..571)
DNA (570bp) protein (190aa)
mannose-1-phosphate guanylyltransferase (GDP)/mannose-6-phosphate isomerase, type 2
seg (db=Seg db_id=seg from=125 to=137)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=8 to=190 evalue=2.8e-32)
MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF1 from=8 to=190 evalue=2.8e-32)
ACD4_87_2
unknown

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comp(538..642)
DNA (105bp) protein (35aa)
seg (db=Seg db_id=seg from=20 to=31)
ACD4_87_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

695..2194
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JF39_AGRRK (db=UNIREF evalue=2.0e-08 bit_score=64.7 identity=37.93 coverage=16.2)
hypothetical protein (db=KEGG evalue=2.0e-08 bit_score=64.7 identity=37.93 coverage=16.2)
seg (db=Seg db_id=seg from=44 to=57)
seg (db=Seg db_id=seg from=70 to=81)
ACD4_87_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

2311..2466
DNA (156bp) protein (52aa)
2311..2466 + (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_87_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

2522..3796
DNA (1275bp) protein (425aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.4.- 3.1.3.-)
seg (db=Seg db_id=seg from=313 to=325)
POLY(A) POLYMERASE (db=HMMPanther db_id=PTHR13734:SF5 from=37 to=227 evalue=8.5e-43)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=37 to=227 evalue=8.5e-43)
ACD4_87_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

3736..4440
DNA (705bp) protein (235aa)
hypothetical protein (db=KEGG evalue=1.0e-18 bit_score=96.3 identity=33.75 coverage=66.8085106382979)
Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q55D56_DICDI (db=UNIREF evalue=1.0e-18 bit_score=96.3 identity=33.75 coverage=66.8085106382979)
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=82 to=210 evalue=3.2e-18 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=55 to=228 evalue=9.4e-17 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD4_87_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(5745..6371)
DNA (627bp) protein (209aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=98)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=153 evalue=1.1e-07)
transmembrane_regions 76..98 Tax=ACD4
ACD4_87_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

6388..6867
DNA (480bp) protein (160aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
seg (db=Seg db_id=seg from=35 to=44)
transmembrane_regions 26..48 Tax=ACD4
ACD4_87_9
ACD4, Gracilibacteria, Bacteria

Not on your lists

6869..7243
DNA (375bp) protein (125aa)
SLH (db=HMMPfam db_id=PF00395 from=22 to=64 evalue=7.3e-05 interpro_id=IPR001119 interpro_description=S-layer homology domain)
SLH (db=ProfileScan db_id=PS51272 from=19 to=82 evalue=9.842 interpro_id=IPR001119 interpro_description=S-layer homology domain)
SLH Tax=ACD4
Displaying 9 items

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