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ACD4_120

Alias: ACD4_9870.12285.15

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_120_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

1..543
DNA (543bp) protein (181aa)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=1 to=180 evalue=9.0e-24)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=3 to=170 evalue=1.7e-13)
DUF1234 (db=HMMPfam db_id=PF06821 from=3 to=167 evalue=7.6e-12 interpro_id=IPR010662 interpro_description=Protein of unknown function DUF1234)
ACD4_120_2
unknown

Not on your lists

559..1209
DNA (651bp) protein (217aa)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP9_9CLOT (db=UNIREF evalue=3.0e-43 bit_score=178.0 identity=43.87 coverage=95.852534562212)
tRNA (guanine-N1)-methyltransferase
seg (db=Seg db_id=seg from=163 to=175)
alpha/beta knot (db=superfamily db_id=SSF75217 from=2 to=213 evalue=3.0e-53)
ACD4_120_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

1219..1833
DNA (615bp) protein (205aa)
hypothetical protein
seg (db=Seg db_id=seg from=94 to=110)
seg (db=Seg db_id=seg from=35 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
ACD4_120_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

1895..2152
DNA (258bp) protein (86aa)
1895..2152 + (rbs_motif=TTAAT rbs_spacer=8bp)
hypothetical protein Tax=ACD4
ACD4_120_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2153..3283)
DNA (1131bp) protein (377aa)
glycosyl transferase
seg (db=Seg db_id=seg from=135 to=149)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=375 evalue=7.2e-63)
GLYCOSYL TRANSFERASE (db=HMMPanther db_id=PTHR12526:SF21 from=2 to=375 evalue=7.2e-63)
ACD4_120_6

Not on your lists

comp(3274..4560)
DNA (1287bp) protein (429aa)
seg (db=Seg db_id=seg from=216 to=228)
seg (db=Seg db_id=seg from=70 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=380 to=411)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
ACD4_120_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4563..4688)
DNA (126bp) protein (42aa)
seg (db=Seg db_id=seg from=15 to=27)
seg (db=Seg db_id=seg from=4 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions 5..27 Tax=ACD4
ACD4_120_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4690..6825)
DNA (2136bp) protein (712aa)
seg (db=Seg db_id=seg from=130 to=141)
seg 130..141 Tax=ACD4
ACD4_120_9
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(7170..7541)
DNA (372bp) protein (124aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions 5..22 Tax=ACD4
ACD4_120_10

Not on your lists

comp(7604..8686)
DNA (1083bp) protein (361aa)
hypothetical protein
seg (db=Seg db_id=seg from=63 to=74)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=67 to=220 evalue=5.1e-23)
no description (db=Gene3D db_id=G3DSA:3.30.870.10 from=67 to=212 evalue=5.0e-21)
ACD4_120_11
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(8686..8970)
DNA (285bp) protein (95aa)
8686..8970 - (rbs_motif=TAAT rbs_spacer=9bp)
hypothetical protein Tax=ACD4
ACD4_120_12
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(8973..9629)
DNA (657bp) protein (219aa)
protein-(glutamine-N5) methyltransferase
seg (db=Seg db_id=seg from=51 to=62)
seg (db=Seg db_id=seg from=35 to=46)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=208 evalue=5.8e-23)
ACD4_120_13

Not on your lists

comp(9616..10380)
DNA (765bp) protein (255aa)
putative ABC transporter permease
Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G4I4_9DELT (db=UNIREF evalue=8.0e-19 bit_score=97.4 identity=49.0 coverage=38.8235294117647)
seg (db=Seg db_id=seg from=225 to=247)
seg (db=Seg db_id=seg from=145 to=172)
ACD4_120_14
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(10455..11186)
DNA (732bp) protein (244aa)
seg (db=Seg db_id=seg from=42 to=53)
Xylose isomerase-like (db=superfamily db_id=SSF51658 from=4 to=243 evalue=8.5e-06 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
seg 42..53 Tax=ACD4
ACD4_120_15

Not on your lists

comp(11189..11623)
DNA (435bp) protein (145aa)
putative pyrophosphohydrolase (db=KEGG evalue=9.0e-15 bit_score=82.4 identity=34.31 coverage=93.1034482758621)
Nudix (db=superfamily db_id=SSF55811 from=11 to=144 evalue=5.9e-14 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=23 to=142 evalue=7.5e-12 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=17 to=144 evalue=2.5e-08 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD4_120_16
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(11625..12323)
DNA (699bp) protein (233aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
seg (db=Seg db_id=seg from=59 to=72)
METHIONYL-TRNA FORMYLTRANSFERASE (db=HMMPanther db_id=PTHR11138 from=1 to=230 evalue=5.6e-39 interpro_id=IPR015518 interpro_description=Methionine tRNA Formyltransferase-like)
Formyltransferase (db=superfamily db_id=SSF53328 from=1 to=122 evalue=3.5e-31 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
Displaying 16 items

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