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ACD4_133

Alias: ACD4_45589.5559.13

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_133_1
ACD4, Gracilibacteria, Bacteria

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1..408
DNA (408bp) protein (136aa)
seg (db=Seg db_id=seg from=107 to=116)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR11845 from=1 to=73 evalue=3.7e-10)
no description (db=Gene3D db_id=G3DSA:1.10.3210.10 from=1 to=96 evalue=5.0e-05)
seg 107..116 Tax=ACD4
ACD4_133_2
unknown

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561..980
DNA (420bp) protein (140aa)
CTP pyrophosphohydrolase (EC:3.6.1.65)
MutT/nudix family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB10_CLOBO (db=UNIREF evalue=2.0e-17 bit_score=91.3 identity=36.8 coverage=87.8571428571429)
Nudix (db=superfamily db_id=SSF55811 from=8 to=135 evalue=1.4e-18 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=9 to=118 evalue=2.2e-13 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD4_133_3
ACD4, Gracilibacteria, Bacteria

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comp(1062..1823)
DNA (762bp) protein (254aa)
putative lipoprotein (db=KEGG evalue=1.0e-07 bit_score=60.1 identity=23.81 coverage=75.9842519685039)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
putative lipoprotein Tax=ACD4
putative lipoprotein alias=ACD1_522.34948.87G0004,ACD1_522.34948.87_4,ACD1_C00004G00004 id=16468 tax=ACD1 species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
ACD4_133_4
ACD4, Gracilibacteria, Bacteria

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1943..2506
DNA (564bp) protein (188aa)
seg (db=Seg db_id=seg from=135 to=146)
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=14 to=162 evalue=7.8e-12 interpro_id=IPR004206 interpro_description=mRNA capping enzyme, beta subunit GO=Molecular Function: polynucleotide 5'-phosphatase activity (GO:0004651), Molecular Function: protein binding (GO:0005515), Biological Process: mRNA capping (GO:0006370), Cellular Component: mRNA cap methyltransferase complex (GO:0031533))
no description (db=Gene3D db_id=G3DSA:2.40.320.10 from=15 to=170 evalue=0.00061)
seg 135..146 Tax=ACD4
ACD4_133_5
ACD4, Gracilibacteria, Bacteria

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2490..3065
DNA (576bp) protein (192aa)
hypothetical protein; K06950 (db=KEGG evalue=7.0e-11 bit_score=70.1 identity=29.73 coverage=68.2291666666667)
coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA)
HD (db=HMMPfam db_id=PF01966 from=32 to=130 evalue=2.0e-09 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=30 to=182 evalue=1.4e-07)
ACD4_133_6
ACD4, Gracilibacteria, Bacteria

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3075..4367
DNA (1293bp) protein (431aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=3 Tax=Clostridium thermocellum RepID=A3DE30_CLOTH (db=UNIREF evalue=3.0e-24 bit_score=116.0 identity=28.57 coverage=71.2296983758701)
seg (db=Seg db_id=seg from=76 to=90)
seg (db=Seg db_id=seg from=24 to=37)
ACD4_133_7
ACD4, Gracilibacteria, Bacteria

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4441..4686
DNA (246bp) protein (82aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=40 to=54)
transmembrane_regions 4..23 Tax=ACD4
ACD4_133_8

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4786..5595
DNA (810bp) protein (270aa)
hypothetical protein
GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR23305:SF4 from=1 to=270 evalue=3.1e-102 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR23305 from=1 to=270 evalue=3.1e-102)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=270 evalue=3.6e-66)
Displaying 8 items

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