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cg1_0.2_scaffold_3124_c

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3124_c_1
R_PER_ii_51_15, PER-ii, Bacteria

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1..270
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PMP7_9ZZZZ
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_PER_ii_51_15_curated
Resolvase helix-turn-helix domain-containing protein
cg1_0.2_scaffold_3124_c_2
CG_PER_01, Peregrinibacteria, Bacteria

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comp(256..1278)
DNA (1023bp) protein (341aa)
mechanosensitive ion channel MscS Tax=CG_PER_01
mechanosensitive ion channel protein MscS id=5091517 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
mechanosensitive ion channel MscS
cg1_0.2_scaffold_3124_c_3
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(1620..2843)
DNA (1224bp) protein (408aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J148_DESMD rbh
antimicrobial peptide ABC transporter permease Tax=CG_PER_01
antimicrobial peptide ABC transporter permease
cg1_0.2_scaffold_3124_c_4
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(2994..3659)
DNA (666bp) protein (222aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=1 Tax=Streptococcus mitis bv. 2 str. F0392 RepID=F9NZN7_STRMT rbh
ABC transporter related protein Tax=CG_PER_01
cg1_0.2_scaffold_3124_c_5
CG_PER_01, Peregrinibacteria, Bacteria

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comp(3664..5481)
DNA (1818bp) protein (606aa)
Efflux transporter, RND family, MFP subunit (Fragment) n=1 Tax=sediment metagenome RepID=D9PI58_9ZZZZ id=982232 bin=RAAC1_SR1 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC1_SR1 organism_group=SR1 rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=CG_PER_01
Efflux transporter, RND family, MFP subunit
cg1_0.2_scaffold_3124_c_6
CG_PER_01, Peregrinibacteria, Bacteria

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comp(5514..5900)
DNA (387bp) protein (129aa)
Tax=CG_PER_01
cg1_0.2_scaffold_3124_c_7
CG_PER_01, Peregrinibacteria, Bacteria

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6079..6747
DNA (669bp) protein (223aa)
OmpR family response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=CG_PER_01
winged helix family two component transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR id=5099054 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version rbh
transcriptional regulator
cg1_0.2_scaffold_3124_c_8
CG_PER_01, Peregrinibacteria, Bacteria

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6748..7941
DNA (1194bp) protein (398aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=CG_PER_01
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XRG3_STAC7 rbh
cg1_0.2_scaffold_3124_c_9
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

8008..8538
DNA (531bp) protein (177aa)
Tax=CG_PER_01
cg1_0.2_scaffold_3124_c_10
unknown

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8480..8659
DNA (180bp) protein (60aa)

This feature has no annotations

cg1_0.2_scaffold_3124_c_11
CG_PER_01, Peregrinibacteria, Bacteria

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comp(8602..8997)
DNA (396bp) protein (132aa)
DoxX family protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S2I2_HALTV rbh
DoxX family protein; K15977 putative oxidoreductase Tax=CG_PER_01
DoxX family protein
cg1_0.2_scaffold_3124_c_trna_1
unknown

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9368..9441
DNA (74bp)
transferRNA
cg1_0.2_scaffold_3124_c_12
CG_PER_01, Peregrinibacteria, Bacteria

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comp(9561..10640)
DNA (1080bp) protein (360aa)
phosphoribosylglycinamide formyltransferase 2; K08289 phosphoribosylglycinamide formyltransferase 2 [EC:2.1.2.2] Tax=CG_PER_01
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Flavobacterium sp. F52 RepID=J1KRK3_9FLAO rbh
phosphoribosylglycinamide formyltransferase 2
cg1_0.2_scaffold_3124_c_13
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

10914..11114
DNA (201bp) protein (67aa)
Tax=CG_PER_01
cg1_0.2_scaffold_3124_c_14
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

11124..11315
DNA (192bp) protein (64aa)
Signal transduction histidine kinase n=1 Tax=uncultured bacterium RepID=K1ZDM2_9BACT
sensor kinase of two-component regulatory system Tax=CG_PER_01
sensor kinase of two-component regulatory system
cg1_0.2_scaffold_3124_c_15
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(11367..12569)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J2K9_DESDA rbh
hypothetical protein Tax=CG_PER_01
hypothetical protein
cg1_0.2_scaffold_3124_c_16
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(12544..14031)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003484A0E rbh
D-alanine export protein Tax=CG_PER_01
D-alanine export protein
cg1_0.2_scaffold_3124_c_17
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

14157..14615
DNA (459bp) protein (153aa)
Tax=CG_PER_01
cg1_0.2_scaffold_3124_c_18
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(14623..16107)
DNA (1485bp) protein (495aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_PER_01
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5802211 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4)
cg1_0.2_scaffold_3124_c_19
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(16108..16473)
DNA (366bp) protein (122aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_PER_01
glutamyl-tRNA(Gln) amidotransferase subunit C
cg1_0.2_scaffold_3124_c_20
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(16464..16745)
DNA (282bp) protein (94aa)
Transposase InsI for insertion sequence element IS30B/C/D n=1 Tax=Microcystis aeruginosa TAIHU98 RepID=L7E9H9_MICAE
Transposase InsI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:ELP55541.1}; TaxID=1134457 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Mi
transposase
Displaying 21 items

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