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cg2_3.0_scaffold_7117_c

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_7117_c_1
CG_GN02-02, Gracilibacteria, Bacteria

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96..458
DNA (363bp) protein (121aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=CG_GN02-02
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DNA polymerase III subunit epsilon (EC:2.7.7.7)
cg2_3.0_scaffold_7117_c_2
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

699..995
DNA (297bp) protein (99aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] Tax=CG_GN02-02
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_7117_c_3
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

1041..2126
DNA (1086bp) protein (362aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=CG_GN02-02
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DnaQ family exonuclease/DinG family helicase
cg2_3.0_scaffold_7117_c_4
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

2139..3017
DNA (879bp) protein (293aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=CG_GN02-02
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DNA polymerase III subunit epsilon (EC:2.7.7.7)
cg2_3.0_scaffold_7117_c_5
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

3094..3693
DNA (600bp) protein (200aa)
seg 111..119 Tax=CG_GN02-02
seg 111..119 id=124606 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg2_3.0_scaffold_7117_c_6
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

3778..3948
DNA (171bp) protein (57aa)
seg 111..119 Tax=CG_GN02-02
seg 111..119 id=124606 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_7117_c_7
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

3951..4679
DNA (729bp) protein (243aa)
transmembrane_regions 12..34 Tax=CG_GN02-02
transmembrane_regions 12..34 id=124607 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg2_3.0_scaffold_7117_c_8
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

4809..5144
DNA (336bp) protein (112aa)
transmembrane_regions 12..34 Tax=CG_GN02-02
transmembrane_regions 12..34 id=124607 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_7117_c_9
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

5468..5842
DNA (375bp) protein (125aa)
type II secretion system protein E n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B26A3 id=124605 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_GN02-02
hypothetical protein
cg2_3.0_scaffold_7117_c_10
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

5960..6217
DNA (258bp) protein (86aa)
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E Tax=CG_GN02-02
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E id=123617 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_7117_c_11
ACD78, Gracilibacteria, Bacteria

Not on your lists

6323..6412
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BCN0_9BACT
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E Tax=ACD78
cg2_3.0_scaffold_7117_c_12
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

6510..7583
DNA (1074bp) protein (358aa)
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-02
Tfp pilus biogenesis protein PilC
cg2_3.0_scaffold_7117_c_13
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(7783..8127)
DNA (345bp) protein (115aa)
putative S-adenosylmethionine-dependent methyltransferase Tax=CG_GN02-02
tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; K07056 id=124303 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
putative S-adenosylmethionine-dependent methyltransferase
cg2_3.0_scaffold_7117_c_14

Not on your lists

comp(8343..8582)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD29587.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cg2_3.0_scaffold_7117_c_15
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(8721..9311)
DNA (591bp) protein (197aa)
transmembrane_regions 4..26 Tax=CG_GN02-02
transmembrane_regions 4..26 id=124567 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg2_3.0_scaffold_7117_c_16
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(9366..9530)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YX39_9BACT rbh
Uncharacterized protein Tax=CG_GN02-02
cg2_3.0_scaffold_7117_c_17
unknown

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9644..9739
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 17 items

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