ggKbase home page

cg2_3.0_scaffold_8212_c

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_8212_c_1
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)
Transposase n=1 Tax=sediment metagenome RepID=D9PIZ7_9ZZZZ
Transposase Tax=GWA1_OD1_47_8
cg2_3.0_scaffold_8212_c_2
unknown

Not on your lists

comp(253..693)
DNA (441bp) protein (147aa)

This feature has no annotations

cg2_3.0_scaffold_8212_c_3
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

709..987
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZR6_9BACT
transmembrane_regions Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
cg2_3.0_scaffold_8212_c_trna_1
unknown

Not on your lists

978..1051
DNA (74bp)
transferRNA
cg2_3.0_scaffold_8212_c_4
R_OD1_58_14, Parcubacteria, Bacteria

Not on your lists

comp(989..1177)
DNA (189bp) protein (63aa)
Recombinase Tax=RIFCSPLOWO2_01_FULL_OD1_58_14_curated
Recombinase id=2720350 bin=GWA1_ZB2_49_26 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
cg2_3.0_scaffold_8212_c_5
unknown

Not on your lists

1178..1918
DNA (741bp) protein (247aa)

This feature has no annotations

cg2_3.0_scaffold_8212_c_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2379..2882
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
cg2_3.0_scaffold_8212_c_7
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

2916..3086
DNA (171bp) protein (57aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
cg2_3.0_scaffold_8212_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3159..3998)
DNA (840bp) protein (280aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_8212_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4014..4490)
DNA (477bp) protein (159aa)
Protein containing Heat shock protein Hsp20 domain n=1 Tax=sediment metagenome PF62_9ZZZZ">RepID=D9PF62_9ZZZZ
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_8212_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4531..5271)
DNA (741bp) protein (247aa)
Protease prsW (EC:3.4.-.-) Tax=CG_Nomura_04
putative protease (EC:3.4.-.-)
hypothetical protein id=5803648 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_8212_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(5253..7559)
DNA (2307bp) protein (769aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Nomura_04
valyl-tRNA synthetase (EC:6.1.1.9)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVT0_9BACT
cg2_3.0_scaffold_8212_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(7602..8768)
DNA (1167bp) protein (389aa)
O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_Nomura_04
hypothetical protein; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=5803482 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
cg2_3.0_scaffold_8212_c_13
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8811..9059)
DNA (249bp) protein (83aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
Displaying 14 items

View Taxonomy