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cg2_3.0_scaffold_1595_c

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1595_c_1
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2..268
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
cg2_3.0_scaffold_1595_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

452..1123
DNA (672bp) protein (224aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1595_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1648..3723)
DNA (2076bp) protein (692aa)
fibronectin type III domain-containing protein Tax=CG_Nomura_04
fibronectin type III protein
fibronectin type III domain-containing protein id=5240696 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cg2_3.0_scaffold_1595_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3729..5036)
DNA (1308bp) protein (436aa)
putative Ferredoxin--NAD(+) reductase (EC:1.18.1.3) Tax=CG_Nomura_04
putative Ferredoxin--NAD(+) reductase (EC:1.18.1.3)
hypothetical protein id=5803636 bin=OD1_GWC2_34_28 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1595_c_trna_3
unknown

Not on your lists

comp(5473..5546)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_1595_c_trna_2
unknown

Not on your lists

comp(5752..5822)
DNA (71bp)
transferRNA
cg2_3.0_scaffold_1595_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5915..6547)
DNA (633bp) protein (211aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5803066 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1595_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6578..8020)
DNA (1443bp) protein (481aa)
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_Nomura_04
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5803067 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gatA; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
cg2_3.0_scaffold_1595_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8039..8329)
DNA (291bp) protein (97aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_Nomura_04
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=5803069 bin=OD1_GWC2_34_28 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C
cg2_3.0_scaffold_1595_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8345..10411)
DNA (2067bp) protein (689aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_Nomura_04
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=uncultured bacterium RepID=K2F1N8_9BACT
cg2_3.0_scaffold_1595_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10517..11047)
DNA (531bp) protein (177aa)
seg Tax=CG_Nomura_04
seg id=5803072 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1595_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11104..11697)
DNA (594bp) protein (198aa)
seg Tax=CG_Nomura_04
seg id=5803073 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1595_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11698..12285)
DNA (588bp) protein (196aa)
seg Tax=CG_Nomura_04
seg id=5803074 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1595_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12326..12979)
DNA (654bp) protein (218aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1595_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13012..13818)
DNA (807bp) protein (269aa)
peptidase a24a, prepilin type iv peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Nomura_04
Prepilin peptidase-1 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXW4_9BACT
peptidase a24a, prepilin type iv peptidase
cg2_3.0_scaffold_1595_c_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13970..14644)
DNA (675bp) protein (225aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein; K07491 putative transposase id=5803338 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_1595_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14792..15283)
DNA (492bp) protein (164aa)
type IV pilus biogenesis protein PilE; K02655 type IV pilus assembly protein PilE Tax=CG_Nomura_04
Putative uncharacterized protein id=5227295 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
type IV pilus biogenesis protein PilE
cg2_3.0_scaffold_1595_c_16
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15512..15685)
DNA (174bp) protein (58aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1595_c_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15747..16946)
DNA (1200bp) protein (400aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_Nomura_04
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system protein
cg2_3.0_scaffold_1595_c_18
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16953..18020)
DNA (1068bp) protein (356aa)
Pilus retraction protein PilT n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWN5_9BACT
pilT; twitching motility protein Tax=CG_Nomura_04
pilT; twitching motility protein
cg2_3.0_scaffold_1595_c_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18017..18403)
DNA (387bp) protein (129aa)
Response regulator receiver protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZB0_9BACT
winged helix family two component transcriptional regulator PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_1595_c_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18490..20211)
DNA (1722bp) protein (574aa)
Type II secretory pathway, ATPase PulE Tax=CG_Nomura_04
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system protein E
cg2_3.0_scaffold_1595_c_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20263..20658)
DNA (396bp) protein (132aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1595_c_22
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20667..21278)
DNA (612bp) protein (204aa)
no description Tax=CG_Nomura_04
no description id=5803083 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1595_c_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21291..21989)
DNA (699bp) protein (233aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1595_c_24
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22007..23101)
DNA (1095bp) protein (365aa)
pilM; type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=CG_Nomura_04
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilus assembly protein PilM
cg2_3.0_scaffold_1595_c_25
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

23162..23845
DNA (684bp) protein (228aa)
phosphoribosyltransferase Tax=CG_Nomura_04
competence protein F; K02242 competence protein ComFC id=5803087 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
phosphoribosyltransferase
cg2_3.0_scaffold_1595_c_26
GWE2_OD1_31_40, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23829..25484)
DNA (1656bp) protein (552aa)
Recombinase Tax=GWE2_OD1_31_40
Recombinase id=4948379 bin=GWA2_Elusimicrobia_56_46 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
recombinase
cg2_3.0_scaffold_1595_c_trna_1
unknown

Not on your lists

23889..23975
DNA (87bp)
transferRNA
cg2_3.0_scaffold_1595_c_27
R_OD1_Kaiserbacteria_51_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25481..25888)
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Kaiserbacteria_51_13_curated
Displaying 30 items

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