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cg2_3.0_scaffold_229_c

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_229_c_1
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_229_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1094..2125)
DNA (1032bp) protein (344aa)
seg Tax=CG_Nomura_04
seg id=5803304 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_229_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2321..4549
DNA (2229bp) protein (743aa)
ftsK; cell division protein ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=CG_Nomura_04
ftsK; cell division protein ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=5803303 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein FtsK
cg2_3.0_scaffold_229_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4577..4984
DNA (408bp) protein (136aa)
seg Tax=CG_Nomura_04
seg id=5803302 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_229_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


4997..5995
DNA (999bp) protein (333aa)
recA; recombinase A; K03553 recombination protein RecA Tax=CG_Nomura_04
protein recA; K03553 recombination protein RecA id=5803301 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recA; Recombinase A (recA)
cg2_3.0_scaffold_229_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6068..6640
DNA (573bp) protein (191aa)
translation elongation factor P Tax=CG_Nomura_04
efp; elongation factor P; K02356 elongation factor P id=5803300 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
translation elongation factor P
cg2_3.0_scaffold_229_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(6712..6909)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0E5_9BACT
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=CG_Nomura_04
30s ribosomal protein S18
cg2_3.0_scaffold_229_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6926..7378)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWC5_9BACT
Single-stranded DNA-binding protein Tax=CG_Nomura_04
Single-stranded DNA-binding protein
cg2_3.0_scaffold_229_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7395..7892)
DNA (498bp) protein (166aa)
seg Tax=CG_Nomura_04
seg id=5227232 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_229_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7937..8746)
DNA (810bp) protein (270aa)
Sec-independent secretion protein TatD; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Nomura_04
sec-independent protein translocase protein (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] id=5803293 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sec-independent secretion protein TatD
cg2_3.0_scaffold_229_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(8754..10304)
DNA (1551bp) protein (517aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Nomura_04
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5803291 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA synthetase (EC:6.1.1.10)
cg2_3.0_scaffold_229_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10368..11486)
DNA (1119bp) protein (373aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_229_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11509..12780)
DNA (1272bp) protein (424aa)
peptidase M16 domain-containing protein Tax=CG_Nomura_04
peptidase M16 domain-containing protein id=5803288 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M16 domain-containing protein
cg2_3.0_scaffold_229_c_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12784..14739)
DNA (1956bp) protein (652aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5803285 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_229_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14770..15360)
DNA (591bp) protein (197aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=5803284 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA repair protein RecO
Tax=CG_Nomura_04
cg2_3.0_scaffold_229_c_16
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15380..18877)
DNA (3498bp) protein (1166aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_Nomura_04
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5803283 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
cg2_3.0_scaffold_229_c_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19211..19693)
DNA (483bp) protein (161aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_229_c_18
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19717..21102)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-G21 RepID=UPI000367BC98
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_229_c_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21138..21446)
DNA (309bp) protein (103aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_229_c_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21421..21711)
DNA (291bp) protein (97aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_229_c_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(21834..23408)
DNA (1575bp) protein (525aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_Nomura_04
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase id=2824174 bin=GWC1_OD1_38_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cg2_3.0_scaffold_229_c_22
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23411..23740)
DNA (330bp) protein (110aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=131021 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
cg2_3.0_scaffold_229_c_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23823..24932)
DNA (1110bp) protein (370aa)
2'-deoxycytidine 5'-triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] Tax=CG_Nomura_04
Deoxycytidine deaminase (EC:3.5.4.13)
2'-deoxycytidine 5'-triphosphate deaminase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F8S3_9RHOB
cg2_3.0_scaffold_229_c_24
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25124..26497
DNA (1374bp) protein (458aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=130384 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
cg2_3.0_scaffold_229_c_25
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(26566..26988)
DNA (423bp) protein (141aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Nomura_04
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5803276 bin=OD1_GWC2_34_28 species=Dialister micraerophilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplK; 50S ribosomal protein L11
cg2_3.0_scaffold_229_c_26
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(27091..27636)
DNA (546bp) protein (182aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=CG_Nomura_04
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG id=5227531 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
NusG antitermination factor
cg2_3.0_scaffold_229_c_27
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(27659..27847)
DNA (189bp) protein (63aa)
Protein translocase complex, SecE/Sec61-gamma subunit Tax=CG_Nomura_04
Protein translocase complex, SecE/Sec61-gamma subunit id=5803274 bin=OD1_GWC2_34_28 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_229_c_28
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(28294..28815)
DNA (522bp) protein (174aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_229_c_29
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(28845..30014)
DNA (1170bp) protein (390aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_229_c_30
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(30339..31790)
DNA (1452bp) protein (484aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=CG_Nomura_04
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00037BC978
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Displaying items 1-30 of 52 in total

View Taxonomy