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CG22_combo_CG10-13_8_21_14_all_scaffold_693_c

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_1
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

153..734
DNA (582bp) protein (194aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_2
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(740..1765)
DNA (1026bp) protein (342aa)
ATP-binding protein Tax=Microchaete sp. PCC 7126 RepID=UPI00034CE9EB
YjeE family ATPase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_3
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

1835..3247
DNA (1413bp) protein (471aa)
s-layer domain-containing protein bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
NlpD5; metalloendopeptidase-like membrane protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_4
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(3236..5431)
DNA (2196bp) protein (732aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BQF8_9BACT
family 5 extracellular solute-binding protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_5
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(5445..5666)
DNA (222bp) protein (74aa)
seg 26..37 bin=ACD65 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
secG; preprotein translocase subunit SecG
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_trna_1
unknown

Not on your lists

comp(5720..5794)
DNA (75bp)
transferRNA Val
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_6
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(5969..7000)
DNA (1032bp) protein (344aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P7C7_VIBME
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_7
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(6997..7956)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2A8E7_9BACT
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KKU52375.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
dihydroorotate dehydrogenase family protein
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_8
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(8019..8333)
DNA (315bp) protein (105aa)
seg bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
membrane protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_9
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(8458..8712)
DNA (255bp) protein (85aa)
UPF0109 protein ACD_51C00101G0004 Tax=uncultured bacterium RepID=K2BPH0_9BACT
RNA-binding protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_10
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists


comp(8724..9050)
DNA (327bp) protein (109aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
rpsP; 30S ribosomal protein S16
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_11
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

9055..10611
DNA (1557bp) protein (519aa)
Probable aggregation factor core protein MAFp3, isoform C Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YIM6_LYNSP
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_12
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(10608..11651)
DNA (1044bp) protein (348aa)
group 1 glycosyl transferase bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_13
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

11658..12515
DNA (858bp) protein (286aa)
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBR1_PHYMF
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_14
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

12541..13074
DNA (534bp) protein (178aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_15
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(13040..13927)
DNA (888bp) protein (296aa)
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=PPNK_GEODF
ATP-NAD/AcoX kinase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_16
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(13924..14994)
DNA (1071bp) protein (357aa)
group 1 glycosyl transferase bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_17
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

15024..15608
DNA (585bp) protein (195aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_18
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

15605..15901
DNA (297bp) protein (99aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_19
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(15906..16811)
DNA (906bp) protein (302aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
fructose-1,6-bisphosphatase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_20
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(16798..17865)
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E0V5_9BACT
glyceraldehyde-3-phosphate dehydrogenase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_21
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(17902..18951)
DNA (1050bp) protein (350aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_22
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(18986..20356)
DNA (1371bp) protein (457aa)
tjr:TherJR_2972 replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.1.-] bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
replicative DNA helicase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_23
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists


comp(20369..21415)
DNA (1047bp) protein (349aa)
recA; recombinase A; K03553 recombination protein RecA bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
recA; recombinase recA
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_24
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(21494..22246)
DNA (753bp) protein (251aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_25
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(22326..23372)
DNA (1047bp) protein (349aa)
RNA polymerase sigma factor Tax=uncultured bacterium RepID=K2DGJ9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_26
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(23709..24095)
DNA (387bp) protein (129aa)
Putative Holliday junction resolvase Tax=Chloroflexus RepID=RUVX_CHLAA
Holliday junction resolvase YqgF
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_27
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists


comp(24097..24378)
DNA (282bp) protein (94aa)
30S ribosomal protein S20 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C330_THEGP
30S ribosomal protein S20
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_28
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

24409..26184
DNA (1776bp) protein (592aa)
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
glucosamine/fructose-6-phosphate aminotransferase
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_693_c_29
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(26192..28747)
DNA (2556bp) protein (852aa)
ftsI; cell division protein FtsI (EC:2.4.1.129)
ftsI; cell division protein FtsI; K08384 stage V sporulation protein D (sporulation-specific penicillin-binding protein) bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
Displaying items 1-30 of 33 in total

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