ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_1
unknown

Not on your lists

118..249
DNA (132bp) protein (44aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_2
RBG_16_OP11_Gottesmanbacteria_43_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

268..915
DNA (648bp) protein (216aa)
Transposase-like protein bin=GWD2_CPR2_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
transposase IS200-family protein
Tax=RBG_16_OP11_Gottesmanbacteria_43_7_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_3
Parcubacteria bacterium GW2011_GWB1_35_5, Parcubacteria, Bacteria

Not on your lists

1021..1851
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CXB1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP80498.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_35_5.;"
Matrixin family protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_4
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(1875..2309)
DNA (435bp) protein (145aa)
smpB; ssrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
smpB; ssrA RNA (tmRNA)-binding protein
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_5
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

2375..3934
DNA (1560bp) protein (520aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003641AF6
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_6
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

3956..5203
DNA (1248bp) protein (416aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
Tax=CG_Micra_05
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_7
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

5212..5925
DNA (714bp) protein (238aa)
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX Tax=Acidaminococcus RepID=G4Q689_ACIIR
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

5922..6509
DNA (588bp) protein (196aa)
Thymidylate kinase bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_9
GWC2_OD1_42_6_partial, Parcubacteria, Bacteria

Not on your lists

6518..8248
DNA (1731bp) protein (577aa)
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BW91_ANAMD
Threonine-tRNA ligase {ECO:0000313|EMBL:KKS66343.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_6.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_10
unknown

Not on your lists

8426..8731
DNA (306bp) protein (102aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_11
unknown

Not on your lists

8685..9038
DNA (354bp) protein (118aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_12
unknown

Not on your lists

9016..9231
DNA (216bp) protein (72aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_13
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

9514..9837
DNA (324bp) protein (108aa)
id=3954706 bin=GWB1_Berkelbacteria_38_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_14
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists


9837..10541
DNA (705bp) protein (235aa)
50S ribosomal protein L25 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
50S ribosomal protein L25
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5626_c_15
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

10725..11645
DNA (921bp) protein (307aa)
tRNA-I(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
2-methylthioadenine synthetase
Tax=RBG_13_RIF_OD1_07_36_15_curated
Displaying 15 items

View Taxonomy