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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_1
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

Not on your lists

2..598
DNA (597bp) protein (199aa)
Tax=GWB1_OP11_45_5_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_2
unknown

Not on your lists

645..1040
DNA (396bp) protein (132aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_3
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

1112..2227
DNA (1116bp) protein (372aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5A8_CALAS
hypothetical protein
Tax=RBG_13_OP11_40_15_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_4
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

2173..2892
DNA (720bp) protein (240aa)
sortase bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
sortase family protein
Tax=GWE1_Berkelbacteria_39_12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_5
unknown

Not on your lists

2945..3166
DNA (222bp) protein (74aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_6
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

3846..4595
DNA (750bp) protein (250aa)
Methionine aminopeptidase Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UD75_FERPD
methionine aminopeptidase
Tax=CG_Kuenen_03
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_7
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4630..4848
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Moraxella catarrhalis RepID=D5VCV5_MORCR
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrhalis CO72.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_8
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists


4995..5381
DNA (387bp) protein (129aa)
30S ribosomal protein S13 {ECO:0000313|EMBL:KKQ18230.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
30S ribosomal protein S13 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
30S ribosomal protein S13
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_9
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


5397..5786
DNA (390bp) protein (130aa)
30S ribosomal protein S11 bin=GWC1_CPR2_39_9 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsK; 30S ribosomal protein S11
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_10
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists


5786..6370
DNA (585bp) protein (195aa)
30S ribosomal protein S4 Tax=uncultured bacterium RepID=K1ZPV2_9BACT
30S ribosomal protein S4 {ECO:0000313|EMBL:KKQ18232.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
30S ribosomal protein S4
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_11

Not on your lists

6388..7305
DNA (918bp) protein (306aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:EKD56272.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EKD56272.1};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA-directed RNA polymerase subunit alpha
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_12
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists


7324..7737
DNA (414bp) protein (138aa)
50S ribosomal protein L17 Tax=uncultured bacterium RepID=K2AIS8_9BACT
rplQ; 50S ribosomal protein L17
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_13
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


7700..8086
DNA (387bp) protein (129aa)
50S ribosomal protein L13 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J541_MARPK
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_14
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


8076..8474
DNA (399bp) protein (133aa)
30S ribosomal protein S9 Tax=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) RepID=RS9_THEP1
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995).;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_15

Not on your lists

8491..8790
DNA (300bp) protein (100aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE10847.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
4Fe-4S ferredoxin
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_16
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

Not on your lists

8792..9130
DNA (339bp) protein (113aa)
Ribosome-binding factor A bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Ribosome-binding factor A {ECO:0000313|EMBL:KKQ90943.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_39_10.;"
ribosome-binding factor A
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_17

Not on your lists

9127..9495
DNA (369bp) protein (123aa)
seg 91..101 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56262.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_18
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists


9498..10190
DNA (693bp) protein (231aa)
Phenylalanine--tRNA ligase alpha subunit bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
pheS; phenylalanyl-tRNA synthetase subunit alpha
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_19
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

Not on your lists

10198..12126
DNA (1929bp) protein (643aa)
pheT; phenylalanyl-tRNA synthetase subuit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Phenylalanine-tRNA ligase beta subunit {ECO:0000313|EMBL:KKQ90940.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_39_10.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_20
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


12167..13573
DNA (1407bp) protein (469aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D2186
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_21

Not on your lists

13566..14588
DNA (1023bp) protein (341aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein {ECO:0000313|EMBL:EKD56661.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_22
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

14875..15582
DNA (708bp) protein (236aa)
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX); K02616 phenylacetic acid degradation operon negative regulatory protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
Tax=GWE1_Berkelbacteria_39_12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_23
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(15571..16272)
DNA (702bp) protein (234aa)
Ribonuclease 3 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Ribonuclease 3
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_24
Berkelbacteria bacterium GW2011_GWB1_38_5, Berkelbacteria, Bacteria

Not on your lists

comp(16253..16708)
DNA (456bp) protein (152aa)
N utilization substance protein B homolog bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
N utilization substance protein B-like protein {ECO:0000313|EMBL:KKQ74646.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWB1_38_5.;"
putative transcription termination factor
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_25
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists


comp(17085..19622)
DNA (2538bp) protein (846aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0D71
Tax=BJP_IG2158_OD1_28_51
Displaying 25 items

View Taxonomy