ggKbase home page

CG_4_10_14_0.2_scaffold_753_c

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG_4_10_14_0.2_scaffold_753_c_1
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

768..1346
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
RNA polymerase ECF-like sigma factor
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
CG_4_10_14_0.2_scaffold_753_c_2
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

1349..1591
DNA (243bp) protein (81aa)
transmembrane_regions 41..63 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
CG_4_10_14_0.2_scaffold_753_c_3
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1581..2198
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EXX9_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_4
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2270..3394
DNA (1125bp) protein (375aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
3-hydroxy-3-methylglutaryl-CoA reductase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_5
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

3403..4428
DNA (1026bp) protein (342aa)
apo:Arcpr_0144 hydroxymethylglutaryl-CoA synthase bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Hydroxymethylglutaryl-CoA synthase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_6
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

4451..5599
DNA (1149bp) protein (383aa)
Thiolase bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
acetyl-CoA acetyltransferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_7
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

5614..5919
DNA (306bp) protein (102aa)
hypothetical protein; K07068 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=CG_Roizman_01
CG_4_10_14_0.2_scaffold_753_c_8
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5916..6860
DNA (945bp) protein (315aa)
mevalonate kinase (EC:2.7.1.36)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EXX4_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_9
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(6857..7363)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F1U0_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
CG_4_10_14_0.2_scaffold_753_c_10
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7368..7721)
DNA (354bp) protein (118aa)
transmembrane_regions 20..42 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_11
R_OP11_Roizmanbacteria_37_12, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

7769..8464
DNA (696bp) protein (232aa)
Isoprenyl transferase Tax=uncultured bacterium RepID=K2FTQ6_9BACT
UDP diphosphate synthase
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_37_12_curated
CG_4_10_14_0.2_scaffold_753_c_12
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

8507..9556
DNA (1050bp) protein (350aa)
hypothetical protein bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_13
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

9565..11343
DNA (1779bp) protein (593aa)
dth:DICTH_0616 thermostable DNA ligase (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
thermostable DNA ligase (EC:6.5.1.1)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_14
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(11349..12029)
DNA (681bp) protein (227aa)
Glycosyltransferase Tax=uncultured bacterium RepID=K2ERR2_9BACT
glycosyltransferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_753_c_15
unknown

Not on your lists

12239..12391
DNA (153bp) protein (51aa)

This feature has no annotations

CG_4_10_14_0.2_scaffold_753_c_16
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12614..14944)
DNA (2331bp) protein (777aa)
YYY membrane protein {ECO:0000313|EMBL:KKQ37996.1}; Flags: Fragment;; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
hypothetical protein bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
chlor-arch-YYY domain-containing protein
CG_4_10_14_0.2_scaffold_753_c_17
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


15178..17283
DNA (2106bp) protein (702aa)
tro:trd_1512 valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine-tRNA ligase {ECO:0000313|EMBL:KKQ37995.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
CG_4_10_14_0.2_scaffold_753_c_18
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

17302..18144
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BWA2_9BACT
membrane protein insertase, yidc/oxa1 family
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
CG_4_10_14_0.2_scaffold_753_c_19
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

18181..18666
DNA (486bp) protein (162aa)
Single-stranded nucleic acid binding R3H {ECO:0000313|EMBL:KKQ37991.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein bin=GWC1_OP11_49_16_COMPLETE species=RAAC19 genus=RAAC19 taxon_order=RAAC19 taxon_class=RAAC19 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
CG_4_10_14_0.2_scaffold_753_c_20
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

18880..22986
DNA (4107bp) protein (1369aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ37990.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
CG_4_10_14_0.2_scaffold_753_c_21
unknown

Not on your lists

23012..24097
DNA (1086bp) protein (362aa)

This feature has no annotations

Displaying 21 items

View Taxonomy