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CG_4_10_14_0.2_scaffold_2058_c

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG_4_10_14_0.2_scaffold_2058_c_1
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

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comp(3..518)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ24127.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC1_37_12.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
rplA; 50S ribosomal protein L1
CG_4_10_14_0.2_scaffold_2058_c_2
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(538..960)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 Tax=uncultured bacterium RepID=K2FTZ4_9BACT
50S ribosomal protein L11 {ECO:0000313|EMBL:KKQ36633.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
rplK; 50S ribosomal protein L11
CG_4_10_14_0.2_scaffold_2058_c_3
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(973..1590)
DNA (618bp) protein (206aa)
Transcription antitermination protein nusG {ECO:0000313|EMBL:KKQ36634.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
NusG antitermination factor
CG_4_10_14_0.2_scaffold_2058_c_4
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(1618..1809)
DNA (192bp) protein (64aa)
Protein translocase subunit SecE Tax=uncultured bacterium RepID=K2C0E7_9BACT
secE; preprotein translocase subunit E
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
CG_4_10_14_0.2_scaffold_2058_c_5
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1833..3029)
DNA (1197bp) protein (399aa)
hypothetical protein bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_2058_c_6
RHI_RIF_OP11_01_41_13b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

comp(3307..4785)
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2FW17_9BACT
membrane protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_41_13b_curated
CG_4_10_14_0.2_scaffold_2058_c_7
RHI_RIF_OP11_01_41_13b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

4829..5224
DNA (396bp) protein (132aa)
SOS response transcriptional repressor, RecA-mediated autopeptidase bin=GWF2_OP3_38_59 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_41_13b_curated
CG_4_10_14_0.2_scaffold_2058_c_8
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

5286..6482
DNA (1197bp) protein (399aa)
UniRef90_B5JFU9 Thermophilic metalloprotease (M29) superfamily Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT bin=ACD49 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Thermophilic metalloprotease (M29) superfamily
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
CG_4_10_14_0.2_scaffold_2058_c_9
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(6708..7355)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR72624.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
transmembrane_regions 84..106 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
CG_4_10_14_0.2_scaffold_2058_c_10
RHI_RIF_OP11_01_41_13b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

7607..8920
DNA (1314bp) protein (438aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
putative nucleotidyltransferase/DNA polymerase involved in DNA repair
Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_41_13b_curated
CG_4_10_14_0.2_scaffold_2058_c_11
RHI_RIF_OP11_01_41_13b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

8939..9415
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC8_9BACT bin=ACD12 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_41_13b_curated
CG_4_10_14_0.2_scaffold_2058_c_12
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

9412..11910
DNA (2499bp) protein (833aa)
calcium-transporting ATPase 1 (EC:3.6.3.8)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC bin=GWA2_CPR4_42_17 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
CG_4_10_14_0.2_scaffold_2058_c_13
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11899..13800)
DNA (1902bp) protein (634aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CG45_9BACT
Transketolase domain protein {ECO:0000313|EMBL:KKQ37303.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
transketolase
Displaying 13 items

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