ggKbase home page

rifcsplowo2_01_scaffold_6745

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6745_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3..533)
DNA (531bp) protein (177aa)
Tax=AR6
rifcsplowo2_01_scaffold_6745_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(574..771)
DNA (198bp) protein (66aa)
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=AR6
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_6745_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(810..1091)
DNA (282bp) protein (94aa)
Tax=AR6
rifcsplowo2_01_scaffold_6745_4
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(1122..1565)
DNA (444bp) protein (148aa)
30S ribosomal protein S9 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS9_METKA
rps9p; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=AR6
rps9p; 30S ribosomal protein S9
rifcsplowo2_01_scaffold_6745_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(1614..2027)
DNA (414bp) protein (138aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR6
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_6745_6
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(2035..2409)
DNA (375bp) protein (125aa)
50S ribosomal protein L18e n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S039_FERPA
ribosomal protein L15; K02883 large subunit ribosomal protein L18e Tax=AR6
ribosomal protein L15
rifcsplowo2_01_scaffold_6745_7
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2622..3224)
DNA (603bp) protein (201aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR6
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_6745_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(3322..3846)
DNA (525bp) protein (175aa)
30S ribosomal protein S11 n=4 Tax=Desulfurococcales RepID=RS11_HYPBU id=5103688 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=AR6
30S ribosomal protein S11
rifcsplowo2_01_scaffold_6745_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(3890..4348)
DNA (459bp) protein (153aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=AR6
30S ribosomal protein S4
rifcsplowo2_01_scaffold_6745_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(4359..4940)
DNA (582bp) protein (194aa)
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=AR6
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5051519 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S13
rifcsplowo2_01_scaffold_6745_11
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(4942..5478)
DNA (537bp) protein (179aa)
hypothetical protein; K07572 putative nucleotide binding protein Tax=AR6
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
rifcsplowo2_01_scaffold_6745_12
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5487..5807)
DNA (321bp) protein (107aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=AR6
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
hypothetical protein
rifcsplowo2_01_scaffold_6745_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(5960..6217)
DNA (258bp) protein (86aa)
50S ribosomal protein L21e n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MTI3_9EURY
50S ribosomal protein L21E; K02889 large subunit ribosomal protein L21e Tax=AR6
50S ribosomal protein L21e
rifcsplowo2_01_scaffold_6745_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6271..6669)
DNA (399bp) protein (133aa)
Tax=AR6
rifcsplowo2_01_scaffold_6745_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6726..10130)
DNA (3405bp) protein (1135aa)
Resilin isoform B n=1 Tax=Ctenocephalides felis RepID=G4Y9J2_CTEFE
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_6745_16
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10308..11237)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YTQ7_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW35555.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya
phosphohydrolase
rifcsplowo2_01_scaffold_6745_17
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

11374..11805
DNA (432bp) protein (144aa)
Tax=CG_Pacearch_04
rifcsplowo2_01_scaffold_6745_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11867..12700)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
Site-specific recombinase XerD {ECO:0000313|EMBL:KCZ72093.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanopered
integrase family protein
rifcsplowo2_01_scaffold_6745_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12788..13495
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ECFAE
hypothetical protein Tax=AR17
Acyl-CoA synthetase NDP forming
rifcsplowo2_01_scaffold_6745_20
unknown

Not on your lists

comp(13551..14921)
DNA (1371bp) protein (457aa)
CoA-binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI26_9EURY id=5103524 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
CoA-binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI26_9EURY Tax=AR20
CoA-binding protein
rifcsplowo2_01_scaffold_6745_21

Not on your lists

14949..15698
DNA (750bp) protein (250aa)
threonyl/alanyl tRNA synthetase SAD; K07050 id=18248408 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48411.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein
rifcsplowo2_01_scaffold_6745_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

15704..15982
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDK0_9EURY
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_6745_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

15979..16446
DNA (468bp) protein (156aa)
seg id=5800403 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifcsplowo2_01_scaffold_6745_24
unknown

Not on your lists

16487..16915
DNA (429bp) protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6745_25
unknown

Not on your lists

comp(16927..17541)
DNA (615bp) protein (205aa)

This feature has no annotations

Displaying 25 items

View Taxonomy