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rifcsplowo2_01_scaffold_28884

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_28884_1
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(3..1712)
DNA (1710bp) protein (570aa)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Pacearch_04
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B id=5043737 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
translation initiation factor aIF-2/yIF-2
rifcsplowo2_01_scaffold_28884_2
unknown

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comp(1767..2501)
DNA (735bp) protein (245aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_3
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(2585..3013)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N7M4_9EURY
twitching motility protein PilT Tax=RBG_16_Micrarchaeota_49_10_curated
twitching motility protein PilT
rifcsplowo2_01_scaffold_28884_4
Picrophilus torridus, Picrophilus, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2986..3252)
DNA (267bp) protein (89aa)
Hypothetical transcriptional regulator n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L2A8_PICTO
transcriptional regulator
Hypothetical transcriptional regulator {ECO:0000313|EMBL:AAT42894.1}; TaxID=263820 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Picrophilaceae; Picrophilus.;" source="Picrophilu
rifcsplowo2_01_scaffold_28884_5
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(3330..3530)
DNA (201bp) protein (67aa)
50S ribosomal protein L24e n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTZ2_METIM
50S ribosomal protein L24e
50S ribosomal protein L24e {ECO:0000256|HAMAP-Rule:MF_00773}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanoc
rifcsplowo2_01_scaffold_28884_6
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(3575..3895)
DNA (321bp) protein (107aa)
30S ribosomal protein S28e n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RS28_AERPE id=5103742 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=CG_Pacearch_04
30S ribosomal protein S28e
rifcsplowo2_01_scaffold_28884_7
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


comp(3994..4302)
DNA (309bp) protein (103aa)
50S ribosomal protein L7Ae n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL7A_NANEQ
rpl7ae; 50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=CG_Pacearch_04
rpl7ae; 50S ribosomal protein L7Ae
rifcsplowo2_01_scaffold_28884_8
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

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4392..4997
DNA (606bp) protein (202aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000373148B
nucleoside-diphosphate kinase
rifcsplowo2_01_scaffold_28884_9
unknown

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5016..5273
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_10
unknown

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5426..5656
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_11
unknown

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comp(5729..5878)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6060..6233
DNA (174bp) protein (58aa)
Marine sediment metagenome DNA, contig: S01H1_S03205 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_28884_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6223..6603)
DNA (381bp) protein (127aa)
id=5048700 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_28884_14
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(6542..7324)
DNA (783bp) protein (261aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog Tax=AR15
rifcsplowo2_01_scaffold_28884_15
unknown

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comp(7457..7999)
DNA (543bp) protein (181aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_16
unknown

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8085..8462
DNA (378bp) protein (126aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_17
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8480..9190
DNA (711bp) protein (237aa)
Metal dependent phosphohydrolase id=1871594 bin=GWE2_Bacteroidetes_32_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=GWE2_Bacteroidetes_32_14_curated
metal dependent phosphohydrolase
rifcsplowo2_01_scaffold_28884_18
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

9192..9608
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B60A7C
hypothetical protein Tax=CG_Elusi_03
hypothetical protein
rifcsplowo2_01_scaffold_28884_19
unknown

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comp(9612..10112)
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28884_20

Not on your lists

comp(10167..10766)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62873.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 20 items

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