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rifcsplowo2_01_scaffold_10385

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10385_1
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

1..1161
DNA (1161bp) protein (387aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Pacearch_04
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit
rifcsplowo2_01_scaffold_10385_2
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1176..1727)
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
rifcsplowo2_01_scaffold_10385_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1948..2247
DNA (300bp) protein (100aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=CG_Pacearch_06
Nucleic acid binding OB-fold tRNA/helicase-type id=5799834 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
replication factor A1
rifcsplowo2_01_scaffold_10385_4
unknown

Not on your lists

comp(2522..3412)
DNA (891bp) protein (297aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3582..4763)
DNA (1182bp) protein (394aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=CG_Woesearch_02
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5240748 bin=GW2011_AR10_complete species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_10385_6
unknown

Not on your lists

4861..5214
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5286..5525
DNA (240bp) protein (80aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=5046020 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_10385_8

Not on your lists

5527..5796
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50927.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Addiction module toxin, RelE/StbE family id=5047353 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Addiction module toxin, RelE/StbE family
rifcsplowo2_01_scaffold_10385_9
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(5842..6108)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JC18_9ARCH
Putative uncharacterized protein Tax=Altiarchaeum hamiconexum
plasmid stabilization system protein
rifcsplowo2_01_scaffold_10385_10
unknown

Not on your lists

comp(6105..6389)
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_11
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

comp(6390..7268)
DNA (879bp) protein (293aa)
ubiquinone/menaquinone biosynthesis methyltransferase Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
methyltransferase id=13500 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
methyltransferase
rifcsplowo2_01_scaffold_10385_12
unknown

Not on your lists

comp(7276..7695)
DNA (420bp) protein (140aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_13
unknown

Not on your lists

comp(7755..7928)
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_14
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

comp(7972..9459)
DNA (1488bp) protein (496aa)
glyoxylate reductase (EC:1.1.1.26); K00015 glyoxylate reductase [EC:1.1.1.26] Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
putative D-2-hydroxyacid dehydrogenase id=13501 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
glyoxylate reductase
rifcsplowo2_01_scaffold_10385_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9605..10591
DNA (987bp) protein (329aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_10385_16

Not on your lists

comp(10598..11455)
DNA (858bp) protein (286aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
protease HtpX homolog (EC:3.4.24.-)
Protease HtpX homolog n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=HTPX_PERMH
rifcsplowo2_01_scaffold_10385_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11495..12166)
DNA (672bp) protein (224aa)
id=5045291 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_10385_18
unknown

Not on your lists

comp(12251..12454)
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_19
unknown

Not on your lists

comp(12616..13101)
DNA (486bp) protein (162aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_20
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13094..15085)
DNA (1992bp) protein (664aa)
Putative DNA sulfur modification protein DndD n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P7D5_9MYCO
SMC domain-containing protein
Putative DNA sulfur modification protein DndD {ECO:0000313|EMBL:EFG78010.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
rifcsplowo2_01_scaffold_10385_21
unknown

Not on your lists

comp(15092..15301)
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_22
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(15291..17342)
DNA (2052bp) protein (684aa)
Type III restriction enzyme, res subunit n=1 Tax=Thermosipho africanus (strain TCF52B) RepID=B7IEJ8_THEAB
type III restriction enzyme, res subunit
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ACJ74512.1}; TaxID=484019 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus (s
rifcsplowo2_01_scaffold_10385_23
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17344..18246)
DNA (903bp) protein (301aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7JYV0_CYAP8
Modification methylase {ECO:0000313|EMBL:KKH01401.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei
D12 class N6 adenine-specific DNA methyltransferase
rifcsplowo2_01_scaffold_10385_24
unknown

Not on your lists

comp(18256..18345)
DNA (90bp) protein (30aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10385_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(18371..19444)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H0K6_9EURY
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
rifcsplowo2_01_scaffold_10385_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19467..21188)
DNA (1722bp) protein (574aa)
Surface layer protein B (SlgB-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28859_ARCFU id=5103302 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Surface layer protein B SlgB-2
Surface layer protein B (SlgB-2) Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_10385_27
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21127..21855)
DNA (729bp) protein (243aa)
glycosyl hydrolase family protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
Sialidase
rifcsplowo2_01_scaffold_10385_28
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

21946..23250
DNA (1305bp) protein (435aa)
hypothetical protein; K06915 Tax=CG_Pacearch_01
Putative nucleotidyltransferase id=5799944 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_10385_29

Not on your lists

comp(23431..24261)
DNA (831bp) protein (277aa)
tRNA (Guanine37-N1) -methyltransferase; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=5046348 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (guanine37-N1)-methyltransferase (EC:2.1.1.228)
Uncharacterized protein {ECO:0000313|EMBL:KHO50832.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_01_scaffold_10385_30
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(24316..25167)
DNA (852bp) protein (284aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Thermococcus sp. AM4 RepID=B7R4S5_9EURY
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEB73171.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. A
Displaying items 1-30 of 46 in total

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