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rifcsplowo2_01_scaffold_5070

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5070_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3..176)
DNA (174bp) protein (58aa)
hypothetical protein Tax=AR6
rifcsplowo2_01_scaffold_5070_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(285..572)
DNA (288bp) protein (96aa)
hypothetical protein Tax=AR6
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_5070_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(553..1227)
DNA (675bp) protein (225aa)
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR6
rifcsplowo2_01_scaffold_5070_4
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

1623..3086
DNA (1464bp) protein (488aa)
Putative transporter protein n=1 Tax=planctomycete KSU-1 RepID=I3IIU9_9PLAN
major facilitator transporter Tax=AR6
MFS transporter
rifcsplowo2_01_scaffold_5070_5

Not on your lists


3110..4558
DNA (1449bp) protein (483aa)
Methionyl-tRNA synthetase {ECO:0000313|EMBL:KHO49080.1}; EC=6.1.1.10 {ECO:0000313|EMBL:KHO49080.1};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=1 Tax=sediment metagenome RepID=D9PI47_9ZZZZ
rifcsplowo2_01_scaffold_5070_6
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

4560..4901
DNA (342bp) protein (114aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=AR6
Methionine--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZM73_THELI id=5103240 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Suspect SCG annotation. See neighboring gene [rifcsplowo2_01_scaffold_5070_5].
Methionine-tRNA ligase
rifcsplowo2_01_scaffold_5070_7
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(4909..5181)
DNA (273bp) protein (91aa)
Tax=AR6
rifcsplowo2_01_scaffold_5070_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5562..6383)
DNA (822bp) protein (274aa)
Tax=AR6
rifcsplowo2_01_scaffold_5070_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(6506..7021)
DNA (516bp) protein (172aa)
KH domain protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS35_METIM
KH domain protein; K06961 ribosomal RNA assembly protein Tax=AR6
KH domain protein
rifcsplowo2_01_scaffold_5070_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7044..7355)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
translation initiation factor IF-1; K03236 translation initiation factor 1A Tax=AR6
Translation initiation factor 1A
rifcsplowo2_01_scaffold_5070_11
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7365..7814)
DNA (450bp) protein (150aa)
GCN5-related N-acetyltransferase (GNAT) domain id=5102214 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Tax=AR6
rifcsplowo2_01_scaffold_5070_12
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7818..8123)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SNY1_IGNAA
hypothetical protein; K09148 hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_5070_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8160..8573)
DNA (414bp) protein (138aa)
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=IF2B_METTH id=5103227 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor aIF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 Tax=AR6
Translation initiation factor 2 subunit beta
rifcsplowo2_01_scaffold_5070_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

8658..9110
DNA (453bp) protein (151aa)
Tax=AR6
rifcsplowo2_01_scaffold_5070_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

9131..9547
DNA (417bp) protein (139aa)
Tax=AR6
rifcsplowo2_01_scaffold_5070_16
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9544..10395)
DNA (852bp) protein (284aa)
Uncharacterized protein conserved in archaea n=2 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHY8_9EURY id=5103225 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein conserved in archaea Tax=AR6
rifcsplowo2_01_scaffold_5070_17
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10364..10921)
DNA (558bp) protein (186aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=AR6
dCMP deaminase id=5799722 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
CMP/dCMP deaminase zinc-binding protein
rifcsplowo2_01_scaffold_5070_18
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10954..12963)
DNA (2010bp) protein (670aa)
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=AR6
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY id=5103224 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication initiator Cdc21/Cdc54
rifcsplowo2_01_scaffold_5070_19
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13113..13658)
DNA (546bp) protein (182aa)
TATA-box-binding protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY9_9EURY id=5103223 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TATA-box binding family protein; K03120 transcription initiation factor TFIID TATA-box-binding protein Tax=AR6
TATA-box-binding protein
rifcsplowo2_01_scaffold_5070_20
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13854..14906)
DNA (1053bp) protein (351aa)
Tax=AR6
rifcsplowo2_01_scaffold_5070_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14881..15864)
DNA (984bp) protein (328aa)
Tax=AR6
rifcsplowo2_01_scaffold_5070_22
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15893..17572)
DNA (1680bp) protein (560aa)
lig; ATP-dependent DNA ligase (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Tax=AR6
lig; ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase id=3060188 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_5070_23
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

18005..18511
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E02B87
P450 cytochrome; K06966 Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_5070_24
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(18668..19243)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381726B
hypothetical protein
Tax=AR6
rifcsplowo2_01_scaffold_5070_25
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(19240..19920)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003637963
Putative uncharacterized protein Tax=AR6
Displaying 25 items

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