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rifcsplowo2_01_scaffold_57283

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_57283_1
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

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234..560
DNA (327bp) protein (109aa)
hypothetical protein; K09005 hypothetical protein id=15188797 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hypothetical protein; K09005 hypothetical protein Tax=GWE1_Berkelbacteria_39_12
hypothetical protein
rifcsplowo2_01_scaffold_57283_2

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comp(756..941)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QAA1_9EURY id=5103731 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63009.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_57283_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(1030..1377)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWR5_HERA2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
rifcsplowo2_01_scaffold_57283_4

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comp(1575..1886)
DNA (312bp) protein (104aa)
hypothetical protein
Putative uncharacterized protein id=5050164 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45097.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_57283_5

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comp(1879..2103)
DNA (225bp) protein (75aa)
Marine sediment metagenome DNA, contig: S01H1_S06361 {ECO:0000313|EMBL:GAG13804.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_57283_6
AR4, Woesearchaeaota, DPANN, Archaea

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comp(2158..2421)
DNA (264bp) protein (88aa)
id=5044575 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_57283_7
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(2476..2844)
DNA (369bp) protein (123aa)
Diphthamide synthase subunit DPH2-like protein n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV1_9EURY
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=CG_Pacearch_04
putative diphthamide synthesis protein
rifcsplowo2_01_scaffold_57283_8
unknown

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2928..3401
DNA (474bp) protein (158aa)

This feature has no annotations

rifcsplowo2_01_scaffold_57283_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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3419..3727
DNA (309bp) protein (103aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_16_Pacearchaeota_35_8_curated
ogt; methylated-DNA-protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA-protein-cysteine methyltransferase n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9YDF4_AERPE
rifcsplowo2_01_scaffold_57283_10
CG_Woesearch_02, Woesearchaeota, Archaea

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3760..5058
DNA (1299bp) protein (433aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=CG_Woesearch_02
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase id=5800119 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_57283_11
unknown

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5068..5466
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_57283_12

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5408..6364
DNA (957bp) protein (319aa)
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
NAD-dependent epimerase/dehydratase family protein id=5800153 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AJF61484.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_57283_13
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6413..7207
DNA (795bp) protein (265aa)
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Nucleotidyl transferase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PCA3_9FIRM
Nucleotidyl transferase {ECO:0000313|EMBL:CDC21135.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
rifcsplowo2_01_scaffold_57283_14
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

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7250..7843
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:793 RepID=R5NCU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKT51682.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
rifcsplowo2_01_scaffold_57283_15
unknown

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7840..8292
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_57283_16
unknown

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comp(8368..8682)
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_57283_17
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(8706..9626)
DNA (921bp) protein (307aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJ37_THEBM
phenylalanyl-tRNA synthetase subunit beta
Displaying 17 items

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