ggKbase home page

rifcsplowo2_01_scaffold_68201

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_68201_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2..283)
DNA (282bp) protein (94aa)
Putative small multi-drug export n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R1X1_SPISS id=5102906 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
qacE; small multidrug export protein QacE Tax=AR6
small multi-drug export
rifcsplowo2_01_scaffold_68201_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(350..652)
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IAK2_METB6
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=AR6
rpl12p; 50S ribosomal protein L12
rifcsplowo2_01_scaffold_68201_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(723..1613)
DNA (891bp) protein (297aa)
50S ribosomal protein L10 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSW4_METIM
ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=AR6
ribosomal protein L10
rifcsplowo2_01_scaffold_68201_4
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1665..2306)
DNA (642bp) protein (214aa)
60S ribosomal protein l10a; K02865 large subunit ribosomal protein L10Ae Tax=AR6
rpl1P; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=5049625 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl; 50S ribosomal protein L1
rifcsplowo2_01_scaffold_68201_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2483..2758)
DNA (276bp) protein (92aa)
hypothetical protein
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR6
rifcsplowo2_01_scaffold_68201_6
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2783..3331)
DNA (549bp) protein (183aa)
hypothetical protein Tax=AR6
Putative uncharacterized protein id=2195632 bin=GWB2_Geobacter-like_52_12 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
rifcsplowo2_01_scaffold_68201_7
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3437..3994)
DNA (558bp) protein (186aa)
cobA-3; cob(I)alamin adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=AR6
Cob(I)alamin adenosyltransferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GET9_9FIRM
cobinamide adenolsyltransferase
rifcsplowo2_01_scaffold_68201_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

4322..4639
DNA (318bp) protein (106aa)
Transcriptional regulator, MarR family n=2 Tax=Lactobacillus salivarius RepID=Q1WS19_LACS1
MarR family transcriptional regulator Tax=AR6
MarR family transcriptional regulator
rifcsplowo2_01_scaffold_68201_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

4645..5904
DNA (1260bp) protein (420aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA and RNA helicase Tax=AR6
PHP protein
rifcsplowo2_01_scaffold_68201_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5914..6486)
DNA (573bp) protein (191aa)
hypothetical protein; K07159 Tax=AR6
hypothetical protein; K07159 id=5050674 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Displaying 10 items

View Taxonomy