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rifcsplowo2_01_scaffold_23069_12

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_43_24

near complete RP 35 / 55 MC: 4 BSCG 18 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: comp(6296..6832)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RL6_METJA similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 170.0
  • Bit_score: 176
  • Evalue 3.00e-41
rpl6p; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=AR6 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 348
  • Evalue 6.20e-93
rpl6p; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 170.0
  • Bit_score: 176
  • Evalue 8.50e-42

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Taxonomy

AR6 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 537
ATGAGAAAAGATTTTTCCTTTAAAGTGCAGGTCCCGGAAGATGTGGAGGTTTCATTAGGCAAGGACATCGTTGTAAAAGCGAAGGGCAAAGAGCTCTCAAGGAGATTCTTAGCTGGAAGAATCCAGATGAGAAAAGATGGCGGCTTGATAATCATAGAGGCAAAGCAGGGAACAAAGAAAGAGAAAAAAATGGCTGGGACCATAGCTGGCCACATAAGGAACATGATCGGCGGAGTTACAAAAGGATACACTTACCGGCTGCAGGTTGCCGGATCGCACTTCCCTATGAAAGTAGAGATAGATAATGCGGCAAAACAAATTGTCGTGAAGAACTTTCTTGGAGAGCGTATTCCTAGGAAAGCCAGGATATTTCCCGGAGTAGATGTCAAGATCCAAGGAGATTTCATTACAGTGCAATCAATAGATAAAGAAGCGGCAGGACAGACTGCGGCGAACATAGAACAGATAATGAAAGTGAGGAAGAAGGACCGAAGAGTCTTCCAGGATGGGATTTATCTGATTGAGAAGCCAGAGTAA
PROTEIN sequence
Length: 179
MRKDFSFKVQVPEDVEVSLGKDIVVKAKGKELSRRFLAGRIQMRKDGGLIIIEAKQGTKKEKKMAGTIAGHIRNMIGGVTKGYTYRLQVAGSHFPMKVEIDNAAKQIVVKNFLGERIPRKARIFPGVDVKIQGDFITVQSIDKEAAGQTAANIEQIMKVRKKDRRVFQDGIYLIEKPE*