ggKbase home page

rifcsplowo2_01_scaffold_23069

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_23069_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR6
rifcsplowo2_01_scaffold_23069_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

204..932
DNA (729bp) protein (243aa)
glycosyltransferase (EC:2.4.1.-); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=AR6
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=5043615 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyltransferase (EC:2.4.1.-)
rifcsplowo2_01_scaffold_23069_3
unknown

Not on your lists

comp(952..1140)
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsplowo2_01_scaffold_23069_4
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

1189..2496
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0003051DB5
glycosyltransferase Tax=AR6
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
rifcsplowo2_01_scaffold_23069_5

Not on your lists


comp(2927..3178)
DNA (252bp) protein (84aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
rifcsplowo2_01_scaffold_23069_6
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(3205..3639)
DNA (435bp) protein (145aa)
50S ribosomal protein L30P n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P7G2_METFA
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=AR6
rpl30p; 50S ribosomal protein L30
rifcsplowo2_01_scaffold_23069_7
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3633..3926)
DNA (294bp) protein (98aa)
Tax=AR6
rifcsplowo2_01_scaffold_23069_8

Not on your lists


comp(3944..4681)
DNA (738bp) protein (246aa)
30S ribosomal protein S5 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS5_NANEQ id=5103272 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S5P, small subunit ribosomal protein S5 {ECO:0000313|EMBL:KHO48839.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
30S ribosomal protein S5
rifcsplowo2_01_scaffold_23069_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(4718..5242)
DNA (525bp) protein (175aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=AR6
50S ribosomal protein L18
rifcsplowo2_01_scaffold_23069_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5259..5750)
DNA (492bp) protein (164aa)
50S ribosomal protein L19e n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXW0_9EURY
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=AR6
rpl19e; 50S ribosomal protein L19e
rifcsplowo2_01_scaffold_23069_11
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5747..6241)
DNA (495bp) protein (165aa)
Tax=AR6
rifcsplowo2_01_scaffold_23069_12
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(6296..6832)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RL6_METJA
rpl6p; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=AR6
rpl6p; 50S ribosomal protein L6
rifcsplowo2_01_scaffold_23069_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(6834..7223)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=uncultured archaeon GZfos27B6 RepID=Q64BF2_9ARCH
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=AR6
30S ribosomal protein S8
rifcsplowo2_01_scaffold_23069_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7228..7458)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003729D23
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=AR6
SSU ribosomal protein S14P
rifcsplowo2_01_scaffold_23069_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(7466..8017)
DNA (552bp) protein (184aa)
rpl5p; 50S ribosomal protein L5P; K02931 large subunit ribosomal protein L5 Tax=AR6
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5046852 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L5
rifcsplowo2_01_scaffold_23069_16
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(8027..8716)
DNA (690bp) protein (230aa)
30S ribosomal protein S4e n=2 Tax=unclassified Thermoplasmatales RepID=M7U2B6_9EURY
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e Tax=AR6
30S ribosomal protein S4
rifcsplowo2_01_scaffold_23069_17

Not on your lists


comp(8721..9110)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
50S ribosomal protein L24
rifcsplowo2_01_scaffold_23069_18
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(9154..9558)
DNA (405bp) protein (135aa)
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 Tax=CG_Pacearch_05
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=5042311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_23069_19
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

9727..10635
DNA (909bp) protein (303aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFN7_NITHX
HAD family hydrolase Tax=AR6
HAD family hydrolase
rifcsplowo2_01_scaffold_23069_20
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(11191..11757)
DNA (567bp) protein (189aa)
Tax=AR6
rifcsplowo2_01_scaffold_23069_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

11839..12366
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F2N8_9BACT
TspO and MBR-like protein; K07185 tryptophan-rich sensory protein Tax=AR6
TspO and MBR-like protein
rifcsplowo2_01_scaffold_23069_22
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(12421..12822)
DNA (402bp) protein (134aa)
30S ribosomal protein S17P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS17_NANEQ
rps17p; 30S ribosomal protein S17P; K02961 small subunit ribosomal protein S17 Tax=AR6
rps17p; 30S ribosomal protein S17P
rifcsplowo2_01_scaffold_23069_23
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(12959..13294)
DNA (336bp) protein (112aa)
Ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=AR6
Ribonuclease P protein component 1 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6E1_METSF
Ribonuclease P
rifcsplowo2_01_scaffold_23069_24
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13343..13654)
DNA (312bp) protein (104aa)
Protein translation factor SUI1 homolog n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUI1_ARCFU id=5103260 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 Tax=AR6
Protein translation factor SUI1-like protein
rifcsplowo2_01_scaffold_23069_25
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(13667..14023)
DNA (357bp) protein (119aa)
50S ribosomal protein L29P n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NFW3_METST
rpl29p; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=AR6
rpl29p; 50S ribosomal protein L29
rifcsplowo2_01_scaffold_23069_26

Not on your lists


comp(14026..14826)
DNA (801bp) protein (267aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ28_9ZZZZ rbh
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99673.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S3
rifcsplowo2_01_scaffold_23069_27
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14838..15626)
DNA (789bp) protein (263aa)
dapB; Dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=AR6
dapB; Dihydrodipicolinate reductase (EC:1.3.1.26)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036870DA
rifcsplowo2_01_scaffold_23069_28

Not on your lists


comp(15671..16288)
DNA (618bp) protein (206aa)
50S ribosomal protein L22P n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L649_KORCO
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L17e (L22p)
rifcsplowo2_01_scaffold_23069_29

Not on your lists


comp(16317..16709)
DNA (393bp) protein (131aa)
30S ribosomal protein S19 n=1 Tax=Thermococcus zilligii RepID=UPI00029A6AB9
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
rifcsplowo2_01_scaffold_23069_30
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16721..17023)
DNA (303bp) protein (101aa)
Tax=AR6
Displaying items 1-30 of 31 in total

View Taxonomy