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rifcsplowo2_01_scaffold_43

Search features with annotation key words

Displaying items 91-120 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_43_91
unknown

Not on your lists

81724..83544
DNA (1821bp) protein (607aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_92
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(83597..85456)
DNA (1860bp) protein (620aa)
antibiotic transport system permease protein
ABC transporter; K09686 antibiotic transport system permease protein id=5240817 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ABC transporter; K09686 antibiotic transport system permease protein Tax=AR10
rifcsplowo2_01_scaffold_43_93
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(85443..86435)
DNA (993bp) protein (331aa)
antibiotic transport system ATP-binding protein
ABC transporter; K09687 antibiotic transport system ATP-binding protein id=5240818 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=AR10
rifcsplowo2_01_scaffold_43_94
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

86767..88050
DNA (1284bp) protein (428aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1AMX8_9EURY
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EJG06198.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source=
hypothetical protein
rifcsplowo2_01_scaffold_43_95
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(88065..88754)
DNA (690bp) protein (230aa)
hypothetical protein
hypothetical protein id=5240742 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsplowo2_01_scaffold_43_96
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

88858..89475
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KDG4_HALHC
hypothetical protein Tax=RBG_13_Planctomycetes_60_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_43_97
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(89504..90127)
DNA (624bp) protein (208aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMD8_9CHLR
membrane protein, MarC family
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_01_scaffold_43_98
unknown

Not on your lists

90291..90590
DNA (300bp) protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_99
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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90578..90880
DNA (303bp) protein (101aa)
Glycosyl transferase family 2 n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK70_DESAA
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACL02745.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="De
rifcsplowo2_01_scaffold_43_100
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(90907..92826)
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037312EF
DNA repair helicase rad3 Tax=CG_Woesearch_01
ATP dependent helicase
rifcsplowo2_01_scaffold_43_101
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92886..103565)
DNA (10680bp) protein (3560aa)
Fibronectin type III domain protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L0T8_SAPGL
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:AFC25894.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira
rifcsplowo2_01_scaffold_43_102
unknown

Not on your lists

103696..103965
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_103
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

104061..104828
DNA (768bp) protein (256aa)
hypothetical protein
id=5240695 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsplowo2_01_scaffold_43_104
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

104834..105202
DNA (369bp) protein (123aa)
hypothetical protein
id=5240694 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsplowo2_01_scaffold_43_105
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(105215..106360)
DNA (1146bp) protein (382aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=AR9
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DB9B1
Tryptophan-tRNA ligase
rifcsplowo2_01_scaffold_43_106

Not on your lists

106414..106923
DNA (510bp) protein (170aa)
tRNA-intron endonuclease, archaea type (EC:4.6.1.16)
tRNA-splicing endonuclease; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5240690 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
tRNA-intron endonuclease, archaea type {ECO:0000313|EMBL:AJF59683.1}; EC=4.6.1.16 {ECO:0000313|EMBL:AJF59683.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_43_107

Not on your lists

comp(106933..107208)
DNA (276bp) protein (92aa)
id=5044296 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO48228.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsplowo2_01_scaffold_43_108
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

107264..107617
DNA (354bp) protein (118aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14477.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
hypothetical protein id=18248224 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsplowo2_01_scaffold_43_109
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

107791..108714
DNA (924bp) protein (308aa)
nhaA3; DSBA-like thioredoxin domain-containing protein Tax=CG_Micra_06
DSBA oxidoreductase id=5044103 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
protein-disulfide isomerase-like protein
rifcsplowo2_01_scaffold_43_110
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108785..108961)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WYC3_BACMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW25971.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Haloba
rifcsplowo2_01_scaffold_43_111
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108987..109169)
DNA (183bp) protein (61aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
rifcsplowo2_01_scaffold_43_112
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(109333..109908)
DNA (576bp) protein (192aa)
Putative membrane protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXM2_METHD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB48803.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanome
rifcsplowo2_01_scaffold_43_113
unknown

Not on your lists

comp(109905..110669)
DNA (765bp) protein (255aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_114
unknown

Not on your lists

110722..111954
DNA (1233bp) protein (411aa)
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML id=5103851 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML Tax=AR20
Transporter, monovalent cation:proton antiporter-2 family protein
rifcsplowo2_01_scaffold_43_115
unknown

Not on your lists

comp(111961..112659)
DNA (699bp) protein (233aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_116
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

112748..112987
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LXX7_9EURY
Uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
rifcsplowo2_01_scaffold_43_117
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

113031..113255
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LSA2_9EURY
RelE protein; K06218 RelE protein Tax=CG_Micra_02
rifcsplowo2_01_scaffold_43_118
unknown

Not on your lists

comp(113264..114370)
DNA (1107bp) protein (369aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_119
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

114496..115005
DNA (510bp) protein (170aa)
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
Alkyl hydroperoxide reductase id=3606175 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
2-cys peroxiredoxin
rifcsplowo2_01_scaffold_43_120
R_RIF_OD1_13_49_12, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

115024..115626
DNA (603bp) protein (201aa)
manganese/iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_12_curated
Superoxide dismutase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKM5_9FIRM
manganese/iron superoxide dismutase
Displaying items 91-120 of 218 in total

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