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rifcsplowo2_01_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_43_1
unknown

Not on your lists

3..557
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

601..1371
DNA (771bp) protein (257aa)
diphthine synthase (EC:2.1.1.98)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] id=5240845 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=AR10
rifcsplowo2_01_scaffold_43_3

Not on your lists

1376..1666
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55678.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
hypothetical protein; K09728 hypothetical protein id=5240844 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_43_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

1712..2749
DNA (1038bp) protein (346aa)
radical SAM protein n=1 Tax=Segetibacter koreensis RepID=UPI000363E614
radical sam domain protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
putative Fe-S oxidoreductase
rifcsplowo2_01_scaffold_43_5
unknown

Not on your lists

2800..3258
DNA (459bp) protein (153aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3271..3552)
DNA (282bp) protein (94aa)
putative acylphosphatase (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7] Tax=RBG_16_Chloroflexi_57_11_curated
Acylphosphatase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CVA1_TRURR
acylphosphatase
rifcsplowo2_01_scaffold_43_7

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comp(3552..3989)
DNA (438bp) protein (146aa)
hypothetical protein
NUDIX hydrolase domain id=5240841 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59833.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_43_8
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4043..4363
DNA (321bp) protein (107aa)
Putative CutA1 divalent ion tolerance protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GAW9_DESGI
putative CutA1 divalent ion tolerance protein
Putative CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:AGW13438.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibri
rifcsplowo2_01_scaffold_43_9
unknown

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comp(4372..4734)
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

4797..6341
DNA (1545bp) protein (515aa)
putative alternative thymidylate synthase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
thymidylate synthase id=5095793 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
putative alternative thymidylate synthase
rifcsplowo2_01_scaffold_43_11
unknown

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comp(6362..7210)
DNA (849bp) protein (283aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_12
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(7526..8608)
DNA (1083bp) protein (361aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFOXYA2_FULL_RIF01_40_8_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
phosphoribosylaminoimidazole synthetase n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036DF545 rbh
rifcsplowo2_01_scaffold_43_13
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8648..9985)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003777ED3
thiC-1; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
thiamine biosynthesis protein ThiC
rifcsplowo2_01_scaffold_43_14

Not on your lists

comp(9995..11380)
DNA (1386bp) protein (462aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Adenylosuccinate lyase {ECO:0000313|EMBL:KHO46482.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KHO46482.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
adenylosuccinate lyase (EC:4.3.2.2)
rifcsplowo2_01_scaffold_43_15
unknown

Not on your lists

11465..12385
DNA (921bp) protein (307aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_16
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

comp(13083..13856)
DNA (774bp) protein (258aa)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RBG_13_OP11_40_7b_curated
inositol-1-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=14425164 bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
inositol-phosphate phosphatase (EC:3.1.3.25)
rifcsplowo2_01_scaffold_43_17

Not on your lists

comp(13853..14857)
DNA (1005bp) protein (335aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=5240828 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000313|EMBL:AJF59820.1}; EC=6.3.2.6 {ECO:0000313|EMBL:AJF59820.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_43_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14848..15471)
DNA (624bp) protein (208aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68955.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
Isochorismatase family protein id=1355377 bin=GWE1_T_denit_62_9 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
isochorismatase hydrolase
rifcsplowo2_01_scaffold_43_19
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(15476..16324)
DNA (849bp) protein (283aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5240827 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=AR10
rifcsplowo2_01_scaffold_43_20

Not on your lists

16438..17706
DNA (1269bp) protein (423aa)
purA; adenylosuccinate synthase (EC:6.3.4.4)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] id=5240826 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
rifcsplowo2_01_scaffold_43_21
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

17805..18383
DNA (579bp) protein (193aa)
Tax=CG_Micra_05
rifcsplowo2_01_scaffold_43_22
CG_Micra_05, Micraarchaeota, Archaea

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18418..18687
DNA (270bp) protein (90aa)
Tax=CG_Micra_05
rifcsplowo2_01_scaffold_43_23
unknown

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comp(19138..19500)
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_43_24
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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19888..20184
DNA (297bp) protein (99aa)
Pathogenicity locus id=7201821 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Pathogenicity locus Tax=RIFOXYC12_FULL_TA06_54_24_curated
Pathogenicity locus
rifcsplowo2_01_scaffold_43_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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20184..20639
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FWD9_9BACT
EbsC; hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
putative aminoacyl-tRNA deacylase
rifcsplowo2_01_scaffold_43_26
AR9, Woesearchaeaota, DPANN, Archaea

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comp(20626..21399)
DNA (774bp) protein (258aa)
Tax=AR9
rifcsplowo2_01_scaffold_43_27

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21463..22707
DNA (1245bp) protein (415aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1) id=5240824 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Marine sediment metagenome DNA, contig: S06H3_C01989 {ECO:0000313|EMBL:GAI01882.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_43_28
CG_Micra_01, Micraarchaeota, Archaea

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22859..23395
DNA (537bp) protein (179aa)
nitroreductase Tax=CG_Micra_01
nitroreductase id=7200649 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
NAD(P)H oxidase
rifcsplowo2_01_scaffold_43_29
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23417..24220)
DNA (804bp) protein (268aa)
Putative alpha/beta hydrolase protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8P5F5_RALSL
Probable hydrolase {ECO:0000313|EMBL:CEL21633.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
putative alpha/beta hydrolase; protein
rifcsplowo2_01_scaffold_43_30

Not on your lists

comp(24217..24702)
DNA (486bp) protein (162aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Uncharacterized protein id=5799602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60933.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Displaying items 1-30 of 218 in total

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