ggKbase home page

rifcsplowo2_01_scaffold_761

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_761_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2..367
DNA (366bp) protein (122aa)
glycosyl transferase group 1
glycosyl transferase group 1 id=5241072 bin=GW2011_AR10_complete species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
glycosyl transferase group 1 Tax=AR10
rifcsplowo2_01_scaffold_761_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

372..1364
DNA (993bp) protein (331aa)
putative nucleotide sugar epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5241048 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
putative nucleotide sugar epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=AR10
hypothetical protein
rifcsplowo2_01_scaffold_761_3
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1375..2235
DNA (861bp) protein (287aa)
rfbD; dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=GWC2_Ignavibacteria_rel_36_12_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D555_METSW
rifcsplowo2_01_scaffold_761_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2228..3142
DNA (915bp) protein (305aa)
family 2 glycosyl transferase
family 2 glycosyl transferase id=5241081 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
family 2 glycosyl transferase Tax=AR10
rifcsplowo2_01_scaffold_761_5
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

3168..4136
DNA (969bp) protein (323aa)
yfnG; sporulation NAD-dependent epimerase/dehydratase YfnG; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
NAD-dependent epimerase/dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] id=24574332 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
rifcsplowo2_01_scaffold_761_6
unknown

Not on your lists

4227..4664
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_7

Not on your lists

4703..5677
DNA (975bp) protein (325aa)
dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=5241073 bin=GW2011_AR10_complete species=Thermoplasmatales archaeon SCGC AB-539-C06 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AJF60064.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AJF60064.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_761_8
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

5674..6408
DNA (735bp) protein (245aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:ACI19011.1}; EC=2.7.7.24 {ECO:0000313|EMBL:ACI19011.1};; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dicty
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YBG5_DICT6
rifcsplowo2_01_scaffold_761_9

Not on your lists

6508..7959
DNA (1452bp) protein (484aa)
Magnesium-protoporphyrin IX monomethyl ester (Oxidative) cyclase {ECO:0000313|EMBL:KHO55815.1}; EC=1.14.13.81 {ECO:0000313|EMBL:KHO55815.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_
bchE; Fe-S oxidoreductase
bchE; Fe-S oxidoreductase id=5241084 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_761_10
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8015..9676
DNA (1662bp) protein (554aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000255|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000255|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000255|HAMAP-Rule:MF_01543}; Short=FHS {ECO:0
Formate--tetrahydrofolate ligase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=FTHS_CARHZ
rifcsplowo2_01_scaffold_761_11
unknown

Not on your lists

9771..9902
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_12
unknown

Not on your lists

9902..10147
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_13
unknown

Not on your lists

comp(10177..10461)
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_14

Not on your lists

10631..11608
DNA (978bp) protein (326aa)
hypothetical protein
putative glycosyltransferase id=5241085 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60076.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_761_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11605..12708
DNA (1104bp) protein (368aa)
WecB/TagA/CpsF family glycosyl transferase
WecB/TagA/CpsF family glycosyl transferase id=5241086 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
WecB/TagA/CpsF family glycosyl transferase Tax=AR10
rifcsplowo2_01_scaffold_761_16
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12735..13460
DNA (726bp) protein (242aa)
family 2 glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037703B5
rifcsplowo2_01_scaffold_761_17
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(13461..14600)
DNA (1140bp) protein (380aa)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
rifcsplowo2_01_scaffold_761_18
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(14597..15457)
DNA (861bp) protein (287aa)
Uncharacterized protein id=7201320 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Uncharacterized protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
rifcsplowo2_01_scaffold_761_19
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15454..16461)
DNA (1008bp) protein (336aa)
Dihydroflavonol-4-reductase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E9S1_9SPHN
oxidoreductase
Dihydroflavonol-4-reductase {ECO:0000313|EMBL:EHJ61926.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
rifcsplowo2_01_scaffold_761_20
R_WWE3_40_23, WWE3, Bacteria

Not on your lists

comp(16473..17783)
DNA (1311bp) protein (437aa)
id=4189491 Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
Putative uncharacterized protein id=4884164 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
rifcsplowo2_01_scaffold_761_21
R_WWE3_40_23, WWE3, Bacteria

Not on your lists

comp(17785..18564)
DNA (780bp) protein (260aa)
Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
rifcsplowo2_01_scaffold_761_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18561..19643)
DNA (1083bp) protein (361aa)
Radical SAM domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP93_9CHLR rbh
Radical SAM domain protein {ECO:0000313|EMBL:EFH87449.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
hypothetical protein
rifcsplowo2_01_scaffold_761_23
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

comp(19640..20518)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003671E23
putative glycosyltransferase Tax=RIFOXYC2_FULL_RIF01_39_67_curated
putative glycosyltransferase
rifcsplowo2_01_scaffold_761_24
unknown

Not on your lists

comp(20546..21457)
DNA (912bp) protein (304aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_25
unknown

Not on your lists

21513..22793
DNA (1281bp) protein (427aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_26
unknown

Not on your lists

22916..23122
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsplowo2_01_scaffold_761_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23247..23510
DNA (264bp) protein (88aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_01_scaffold_761_28
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

23576..24196
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH97_9EURY
hypothetical protein Tax=CG_Micra_01
hypothetical protein
rifcsplowo2_01_scaffold_761_29
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

24172..24342
DNA (171bp) protein (57aa)
hypothetical protein
seg id=5241227 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
seg Tax=AR10
rifcsplowo2_01_scaffold_761_30
GWB1_OD1_48_6_part, Parcubacteria, Bacteria

Not on your lists

24409..25293
DNA (885bp) protein (295aa)
pyridoxine biosynthesis protein; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=5095885 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
pyridoxine biosynthesis protein (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS {ECO:0000313|EMBL:KKU97666.1}; TaxID=1618881 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_48_6.;"
Displaying items 1-30 of 148 in total

View Taxonomy