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rifcsphigho2_12_scaffold_13113

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_13113_1
unknown

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsphigho2_12_scaffold_13113_2

Not on your lists

215..493
DNA (279bp) protein (93aa)
Marine sediment metagenome DNA, contig: S01H4_L07542 {ECO:0000313|EMBL:GAG75855.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transmembrane_regions id=5042182 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rifcsphigho2_12_scaffold_13113_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

526..2457
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369FE5C
hypothetical protein
Tax=AR9
rifcsphigho2_12_scaffold_13113_4
unknown

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2521..2757
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsphigho2_12_scaffold_13113_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

2831..3049
DNA (219bp) protein (73aa)
AbrB family transcriptional regulator Tax=CG_Pacearch_03
AbrB family transcriptional regulator id=5041622 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_12_scaffold_13113_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3034..3369
DNA (336bp) protein (112aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A864_CLOBO
growth inhibitor Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional modulator of MazE/toxin MazF
rifcsphigho2_12_scaffold_13113_7
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3371..3577
DNA (207bp) protein (69aa)
Marine sediment metagenome DNA, contig: S03H2_S25965 Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsphigho2_12_scaffold_13113_8

Not on your lists

comp(3645..4859)
DNA (1215bp) protein (405aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5240748 bin=GW2011_AR10_complete species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Methionine adenosyltransferase {ECO:0000313|EMBL:KHO51514.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsphigho2_12_scaffold_13113_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4946..5779)
DNA (834bp) protein (278aa)
GTP-binding protein; K06948 Tax=RBG_16_Pacearchaeota_35_8_curated
GTP-binding protein YlqF; K06948 id=5047389 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
GTP-binding protein HSR1-like protein
rifcsphigho2_12_scaffold_13113_10
unknown

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comp(5835..6155)
DNA (321bp) protein (107aa)

This feature has no annotations

rifcsphigho2_12_scaffold_13113_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6227..6388)
DNA (162bp) protein (54aa)
Tax=CG_Pacearch_06
rifcsphigho2_12_scaffold_13113_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

6486..7673
DNA (1188bp) protein (396aa)
Marine sediment metagenome DNA, contig: S01H4_L02638 Tax=CG_Pacearch_01
rifcsphigho2_12_scaffold_13113_13
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7687..8343)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B24BC
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsphigho2_12_scaffold_13113_14
GWD2_OD1_39_48_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8398..9231)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000374630B
Uncharacterized protein {ECO:0000313|EMBL:KKR23813.1}; TaxID=1619031 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWD2_39_48.;"
hypothetical protein
rifcsphigho2_12_scaffold_13113_15
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9290..10033)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8U5_METMS id=5103711 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsphigho2_12_scaffold_13113_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10259..10648
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRB8_BLASD
hypothetical protein
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
rifcsphigho2_12_scaffold_13113_17
unknown

Not on your lists

10708..11106
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsphigho2_12_scaffold_13113_18
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11118..11663
DNA (546bp) protein (182aa)
Transcriptional regulator, ArsR family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S382_FERPA
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADC64715.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus
rifcsphigho2_12_scaffold_13113_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11721..12353
DNA (633bp) protein (211aa)
hypothetical protein; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RBG_16_Pacearchaeota_35_8_curated
MgtC family protein id=2064486 bin=GWE2_Clostridiales_32_10 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
magnesium transport family protein MgtC
rifcsphigho2_12_scaffold_13113_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

12488..14305
DNA (1818bp) protein (606aa)
Tax=CG_Woesearch_03
Displaying 20 items

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