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rifcsphigho2_12_scaffold_918_24

Organism: RIFCSPHIGHO2_12_FULL_Pacearchaeota_34_15

partial RP 34 / 55 MC: 5 BSCG 25 / 51 ASCG 30 / 38 MC: 1
Location: comp(12788..13471)

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=RBG_13_Pacearchaeota_33_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 221.0
  • Bit_score: 335
  • Evalue 5.30e-89
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 227.0
  • Bit_score: 194
  • Evalue 1.00e-46
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 227.0
  • Bit_score: 194
  • Evalue 2.90e-47

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Taxonomy

RBG_13_Pacearchaeota_33_26_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 684
ATGGCAAAAAGCGAACATTCAGAAAGAAAAGTAGTAATTCCTGGGGAAGTTATTTTCAAGGGAGAAGATTATCTGCCTGGCGAAGGAACAGAAAAACGGGGTGATGAGATAGTTGCTATAAAATATGGTTTGGCAGAAGAATCAAATGGTCTTGTAAAGGTAATTTCATTGTCTGGTGTTTATCAGCCAAGAAGGGGGAATGTTGTAATCGGAAAGGTTGAGAACTTAACTTTTTATGGATGGGTTATAGATATTGATTCTCCAGAGGGCGCTTTTTTGCCGTTGCAAGAAGTTCCTGGCTTTGTAAGCAAAGATGGTTTGGCTGAAATAATGGATATTGGAGATATGGTTGCTGCAAAAATAATAGGAATAGGCGGGAGAGGAATAGATCTTACTATAAAATTGCGGGGTTTAGGTAAAATAGAAGATGGATTGATTATAAAAATAAACTCAAACAAAGTTCCAAGGGTAATTGGAAAAGAAGGGAGTATGATAAATCTTATAAAAGAAGAATCAGGGTGTAATGTTACTGTCGGGCAAAATGGATTAATCTGGATAAAGGGAAATAAGATAGAAGACGAATTGCTTGTAAAAAAAGCGATCATGTTCATAACTGAAAAATCTTTCACGAGCGGCTTAACAGAAGAAGTAAAAGAATGGTTTGAAGGGGAGAAAGGAAAATGA
PROTEIN sequence
Length: 228
MAKSEHSERKVVIPGEVIFKGEDYLPGEGTEKRGDEIVAIKYGLAEESNGLVKVISLSGVYQPRRGNVVIGKVENLTFYGWVIDIDSPEGAFLPLQEVPGFVSKDGLAEIMDIGDMVAAKIIGIGGRGIDLTIKLRGLGKIEDGLIIKINSNKVPRVIGKEGSMINLIKEESGCNVTVGQNGLIWIKGNKIEDELLVKKAIMFITEKSFTSGLTEEVKEWFEGEKGK*