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rifcsphigho2_12_scaffold_918

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_918_1
unknown

Not on your lists

comp(206..535)
DNA (330bp) protein (110aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_2
unknown

Not on your lists

comp(592..861)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

952..1191
DNA (240bp) protein (80aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsphigho2_12_scaffold_918_4
unknown

Not on your lists

1241..1945
DNA (705bp) protein (235aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_5
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1985..2437
DNA (453bp) protein (151aa)
DNA ligase D, 3'-phosphoesterase domain protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Pacearchaeota_35_8_curated
ATP-dependent DNA ligase (EC:6.5.1.1)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP6_METBF
rifcsphigho2_12_scaffold_918_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2639..2935
DNA (297bp) protein (99aa)
hypothetical protein Tax=CG_Pacearch_06
rifcsphigho2_12_scaffold_918_7

Not on your lists

2949..3176
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJB7_9ZZZZ
Marine sediment metagenome DNA, contig: S06H3_S00525 {ECO:0000313|EMBL:GAI26278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_12_scaffold_918_8
unknown

Not on your lists

comp(3210..3992)
DNA (783bp) protein (261aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_9
unknown

Not on your lists

comp(4023..4940)
DNA (918bp) protein (306aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_10
unknown

Not on your lists

comp(5034..5717)
DNA (684bp) protein (228aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_11
unknown

Not on your lists

comp(5792..6466)
DNA (675bp) protein (225aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_12
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(6511..7407)
DNA (897bp) protein (299aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2 Tax=AR13
30S ribosomal protein S2
rifcsphigho2_12_scaffold_918_13
unknown

Not on your lists

comp(7458..7676)
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_14
unknown

Not on your lists

comp(7731..7964)
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_15
unknown

Not on your lists

8040..8387
DNA (348bp) protein (116aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_16
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8388..9554)
DNA (1167bp) protein (389aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=AR19
eno; phosphopyruvate hydratase Eno (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
rifcsphigho2_12_scaffold_918_17
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9697..10077)
DNA (381bp) protein (127aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_16_Pacearchaeota_35_8_curated
UPI000021CFC7 related cluster n=1 Tax=unknown RepID=UPI000021CFC7 id=5103847 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_12_scaffold_918_18
unknown

Not on your lists

comp(10079..10411)
DNA (333bp) protein (111aa)
Lipid A 3-O-deacylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZRZ6_MELRP id=5103522 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lipid A 3-O-deacylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZRZ6_MELRP Tax=AR20
Lipid A 3-O-deacylase
rifcsphigho2_12_scaffold_918_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(10413..11213)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285
rrp42; exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Pacearchaeota_35_8_curated
Ribosomal RNA-processing protein RRP42
rifcsphigho2_12_scaffold_918_20
unknown

Not on your lists

comp(11215..11496)
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_21
unknown

Not on your lists

comp(11481..11816)
DNA (336bp) protein (112aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_22
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11818..12525)
DNA (708bp) protein (236aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ribosomal RNA-processing protein RRP41/SKI6 Tax=RBG_16_Pacearchaeota_35_8_curated
exosome complex exonuclease Rrp41
rifcsphigho2_12_scaffold_918_23
unknown

Not on your lists

comp(12522..12791)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_24
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12788..13471)
DNA (684bp) protein (228aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=RBG_13_Pacearchaeota_33_26_curated
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative exosome complex RNA-binding protein 1
rifcsphigho2_12_scaffold_918_25
unknown

Not on your lists

comp(13473..13685)
DNA (213bp) protein (71aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_26

Not on your lists


comp(13675..14355)
DNA (681bp) protein (227aa)
Marine sediment metagenome DNA, contig: S01H1_L00021 {ECO:0000313|EMBL:GAF77057.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Ribosome maturation protein SBDS id=5800798 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosome maturation protein SBDS-like protein
rifcsphigho2_12_scaffold_918_27
unknown

Not on your lists

comp(14352..14567)
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_12_scaffold_918_28
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(14564..15289)
DNA (726bp) protein (242aa)
proteasome endopeptidase complex subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=RBG_13_Pacearchaeota_33_26_curated
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha
rifcsphigho2_12_scaffold_918_29

Not on your lists

comp(15414..15683)
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 {ECO:0000313|EMBL:GAI25822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_12_scaffold_918_30
unknown

Not on your lists

comp(15717..16055)
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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