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gwc1_scaffold_753

Alias: GWC1_OP11_37_12_14

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
gwc1_scaffold_753_1
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

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2..5095
-----------------
DNA (5094bp)
protein (1698aa)
triple helix repeat-containing collagen
Collagen triple helix repeat
gwc1_scaffold_753_2
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

5097..5651
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDD6_DESAR
hypothetical protein
gwc1_scaffold_753_3
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

5648..10255
-----------------
DNA (4608bp)
protein (1536aa)
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_753_4
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

10343..10723
-----------------
DNA (381bp)
protein (127aa)
S23 ribosomal protein
S23 ribosomal protein
gwc1_scaffold_753_5
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

10720..11469
-----------------
DNA (750bp)
protein (250aa)
gwc1_scaffold_753_6
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

11824..13548
-----------------
DNA (1725bp)
protein (575aa)
Tetratricopeptide TPR_2
transmembrane_regions 175..197 alias=ACD12_C00351G00002,ACD12_8092.2404.10G0002,ACD12_8092.2404.10_2 id=5873 tax=ACD12 species=
gwc1_scaffold_753_7
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(13561..14616)
-----------------
DNA (1056bp)
protein (352aa)
lipoprotein
hypothetical protein alias=ACD12_C00351G00001,ACD12_8092.2404.10G0001,ACD12_8092.2404.10_1 id=5874 tax=ACD12 species=unknown genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OP11 organism_desc=
gwc1_scaffold_753_8
GWC2_OP11P37_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14629..15873)
-----------------
DNA (1245bp)
protein (415aa)
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase
gwc1_scaffold_753_9
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15891..16847)
-----------------
DNA (957bp)
protein (319aa)
acp:A2cp1_4094 thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] alias=ACD12_7451.7634.10_2,ACD12_7451.7634.10G0002,ACD12_C00181G00002 id=4973 tax=ACD12 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
thioredoxin reductase
gwc1_scaffold_753_10
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(16844..17074)
-----------------
DNA (231bp)
protein (77aa)
transcriptional regulator
DUF156 alias=ACD12_7451.7634.10_3,ACD12_7451.7634.10G0003,ACD12_C00181G00003 id=4966 tax=ACD12 species=
gwc1_scaffold_753_11
GWC2_OP11P37_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(17299..18567)
-----------------
DNA (1269bp)
protein (423aa)
rho; transcription termination factor Rho
ttr:Tter_1339 transcription termination factor Rho; K03628 transcription termination factor Rho alias=ACD12_7451.7634.10G0004,ACD12_7451.7634.10_4,ACD12_C00181G00004 id=4972 tax=ACD12 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=
gwc1_scaffold_753_12
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(18862..20796)
-----------------
DNA (1935bp)
protein (645aa)
gwc1_scaffold_753_13
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(20811..22811)
-----------------
DNA (2001bp)
protein (667aa)
gwc1_scaffold_753_14
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

22845..23129
-----------------
DNA (285bp)
protein (95aa)
gwc1_scaffold_753_15
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(23076..24962)
-----------------
DNA (1887bp)
protein (629aa)
gwc1_scaffold_753_16
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

24979..25857
-----------------
DNA (879bp)
protein (293aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase
gwc1_scaffold_753_17
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(25833..27026)
-----------------
DNA (1194bp)
protein (398aa)
gwc1_scaffold_753_18
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

27608..28417
-----------------
DNA (810bp)
protein (270aa)
thrB; homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39] alias=ACD40_19625.23708.15G0010,ACD40_19625.23708.15_10,ACD40_C00019G00010 id=51518 tax=ACD40 species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
gwc1_scaffold_753_19
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(28407..29186)
-----------------
DNA (780bp)
protein (260aa)
hypothetical protein
CCC1-related iron/manganese transporter component alias=gwa2_scaffold_87_157 id=5084469 tax=GWA2_OP11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project
gwc1_scaffold_753_20
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(29183..30484)
-----------------
DNA (1302bp)
protein (434aa)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase
gwc1_scaffold_753_21
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(30481..31599)
-----------------
DNA (1119bp)
protein (373aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
gwc1_scaffold_753_22
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(31609..32082)
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZC14_9BACT alias=RAAC19_AAC14_scaffold_601_7,RAAC19_C00007G00007 id=699407 tax=RAAC19 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
hypothetical protein
gwc1_scaffold_753_23
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(32099..32983)
-----------------
DNA (885bp)
protein (295aa)
Laminin G, domain-containing 2 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5M0_CHLAD
hypothetical protein
gwc1_scaffold_753_24
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(33007..33516)
-----------------
DNA (510bp)
protein (170aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] alias=ACD50_C00118G00025,ACD50_72014.25789.8G0025,ACD50_72014.25789.8_25 id=72390 tax=ACD50 species=Geobacillus sp. WCH70 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OP11 organism_desc=OP11
dihydrofolate reductase
gwc1_scaffold_753_25
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(33546..34520)
-----------------
DNA (975bp)
protein (325aa)
hypothetical protein
Thymidylate synthase
gwc1_scaffold_753_26
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(34616..35887)
-----------------
DNA (1272bp)
protein (424aa)
FolC bifunctional protein
Multifunctional folylpolyglutamate synthase/dihydrofolate synthase (Fragment) alias=AR15_final_v5_635 id=5800158 tax=GW2011_AR15 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
gwc1_scaffold_753_27
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(35950..36516)
-----------------
DNA (567bp)
protein (189aa)
deoxycytidine deaminase n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873C70 alias=ACD12_62393.2148.9G0002,ACD12_62393.2148.9_2,ACD12_C00311G00002 id=5707 tax=ACD12 species=Pseudomonas syringae group genomosp. 3 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
dcd2; deoxycytidine deaminase
gwc1_scaffold_753_28
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(36532..37302)
-----------------
DNA (771bp)
protein (257aa)
gwc1_scaffold_753_29
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(37340..37681)
-----------------
DNA (342bp)
protein (114aa)
Displaying 29 items

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