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gwc2_scaffold_7892

Alias: GWC2_OD1_49_9_27

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_7892_1
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(1..240)
-----------------
DNA (240bp)
protein (80aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
gwc2_scaffold_7892_2
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(349..2385)
-----------------
DNA (2037bp)
protein (679aa)
Ligase protein {ECO:0000313|EMBL:KKW14460.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Lig; NAD-dependent DNA ligase
DNA ligase
gwc2_scaffold_7892_3
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(2603..4225)
-----------------
DNA (1623bp)
protein (541aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_7892_4
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(4209..5015)
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_7892_5
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(4978..5520)
-----------------
DNA (543bp)
protein (181aa)
Ribosomal_S23p Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
Uncharacterized protein
gwc2_scaffold_7892_6
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(5546..6187)
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW14464.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
gwc2_scaffold_7892_7
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(6184..6936)
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW14465.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
gwc2_scaffold_7892_8
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(6950..7699)
-----------------
DNA (750bp)
protein (250aa)
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_c
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme
gwc2_scaffold_7892_9
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(7983..8417)
-----------------
DNA (435bp)
protein (145aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_7892_10
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(8430..8927)
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gspG; general secretion pathway protein G
Protein containing DUF1559
gwc2_scaffold_7892_11
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(9272..9865)
-----------------
DNA (594bp)
protein (198aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_7892_12
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(9934..10503)
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
General secretion pathway protein G
Putative uncharacterized protein
gwc2_scaffold_7892_13
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(10723..11931)
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW02080.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein
Type II secretion system F domain
gwc2_scaffold_7892_14
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(11939..13015)
-----------------
DNA (1077bp)
protein (359aa)
pilT; twitching motility protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
twitching motility protein
twitching motility protein
gwc2_scaffold_7892_15
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(13138..13545)
-----------------
DNA (408bp)
protein (136aa)
Adenylate/guanylate cyclase {ECO:0000313|EMBL:KKW14473.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
adenylate/guanylate cyclase
Adenylate/guanylate cyclase
gwc2_scaffold_7892_16
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(13580..15334)
-----------------
DNA (1755bp)
protein (585aa)
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:KKW14474.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
type IV-a pilus assembly atpase pilb
Type IV-A pilus assembly ATPase PilB
gwc2_scaffold_7892_17
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(15338..16273)
-----------------
DNA (936bp)
protein (312aa)
Marine sediment metagenome DNA, contig: S01H1_S07071 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_7892_18
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(16277..16834)
-----------------
DNA (558bp)
protein (186aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_7892_19
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(16889..17554)
-----------------
DNA (666bp)
protein (222aa)
Putative membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
Displaying 19 items

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