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rifoxya1_full_scaffold_148

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_148_1
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(2..3946)
DNA (3945bp) protein (1315aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP 64.2 RepID=N9N9W4_9GAMM
probable cell surface glycoprotein Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
probable cell surface glycoprotein
rifoxya1_full_scaffold_148_2

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4323..4688
DNA (366bp) protein (122aa)
30S ribosomal protein S8e n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RS8E_ARCFU
Marine sediment metagenome DNA, contig: S03H2_S04643 {ECO:0000313|EMBL:GAH56453.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ribosomal protein S8.e
rifoxya1_full_scaffold_148_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

4816..5748
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AB4A9
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=CG_Pacearch_03
Transcription initiation factor IIB
rifoxya1_full_scaffold_148_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(6168..13031)
DNA (6864bp) protein (2288aa)
Lytic murein transglycosylase Tax=CG_Pacearch_05
Lytic murein transglycosylase
Lytic murein transglycosylase alias=gwa2_scaffold_32_202 id=5040070 tax=GW2011_AR20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_148_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(13024..14874)
DNA (1851bp) protein (617aa)
id=5103088 Tax=RBG_13_Pacearchaeota_36_9_curated
rifoxya1_full_scaffold_148_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(14890..15015)
DNA (126bp) protein (42aa)
Marine sediment metagenome DNA, contig: S01H1_L00093 Tax=RBG_13_Pacearchaeota_36_9_curated
rifoxya1_full_scaffold_148_7

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15319..16068
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:EKE06906.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
seg 145..166 alias=ACD18_C00141G00003,ACD18_378277.2358.5G0003,ACD18_378277.2358.5_3 id=14097 tax=ACD18 species= OD1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OD1, not OD1-i organism_group=OD1, not OD1-i organism_desc= OD1
rifoxya1_full_scaffold_148_8
AR13, Pacearchaeaota, DPANN, Archaea

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comp(16201..16479)
DNA (279bp) protein (93aa)
Tax=AR13
rifoxya1_full_scaffold_148_9

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17024..17689
DNA (666bp) protein (222aa)
Ribosomal protein S3AE {ECO:0000313|EMBL:KHO50336.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
SSU ribosomal protein S3AE
SSU ribosomal protein S3AE alias=gwa2_scaffold_32_206 id=5040074 tax=GW2011_AR20 organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_148_10
R_OD1_Campbellbacteria_35_11, Campbellbacteria, Parcubacteria, Bacteria

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17686..18255
DNA (570bp) protein (190aa)
nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_02_FULL_OD1_Campbellbacteria_35_11_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MTI3_PYRCJ
rifoxya1_full_scaffold_148_11
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18296..18952
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
adenylate kinase (EC:2.7.4.10)
Adenylate kinase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=KAD_CALS8
rifoxya1_full_scaffold_148_12
unknown

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comp(18967..19185)
DNA (219bp) protein (73aa)

This feature has no annotations

rifoxya1_full_scaffold_148_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(19611..20225)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifoxya1_full_scaffold_148_14

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20254..21441
DNA (1188bp) protein (396aa)
Fused signal recognition particle receptor {ECO:0000313|EMBL:KHO53369.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Signal recognition particle GTPase alias=gwa2_scaffold_5864_60 id=5050700 tax=GW2011_AR18 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=gwa2_.30_20c
Signal recognition particle GTPase
rifoxya1_full_scaffold_148_15
unknown

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comp(21438..21596)
DNA (159bp) protein (53aa)

This feature has no annotations

rifoxya1_full_scaffold_148_16
unknown

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comp(21875..22411)
DNA (537bp) protein (179aa)

This feature has no annotations

rifoxya1_full_scaffold_148_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


22641..24035
DNA (1395bp) protein (465aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=RBG_13_Pacearchaeota_33_26_curated
SRP54-type protein, GTPase protein
rifoxya1_full_scaffold_148_18
unknown

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24035..24493
DNA (459bp) protein (153aa)

This feature has no annotations

rifoxya1_full_scaffold_148_19
unknown

Not on your lists

comp(24474..24578)
DNA (105bp) protein (35aa)

This feature has no annotations

rifoxya1_full_scaffold_148_20
unknown

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comp(24726..24830)
DNA (105bp) protein (35aa)

This feature has no annotations

rifoxya1_full_scaffold_148_21
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

24873..25607
DNA (735bp) protein (245aa)
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=RBG_16_Pacearchaeota_35_8_curated
O-sialoglycoprotein endopeptidase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDC3_9EURY
o-sialoglycoprotein endopeptidase
rifoxya1_full_scaffold_148_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25754..26617)
DNA (864bp) protein (288aa)
hypothetical protein Tax=AR18
hypothetical protein alias=gwa2_scaffold_2004_55 id=5047357 tax=GW2011_AR18 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes organism_desc=gwa2_.30_20c
hypothetical protein
rifoxya1_full_scaffold_148_23
unknown

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comp(27618..27830)
DNA (213bp) protein (71aa)

This feature has no annotations

rifoxya1_full_scaffold_148_24
unknown

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comp(27781..27891)
DNA (111bp) protein (37aa)

This feature has no annotations

rifoxya1_full_scaffold_148_25
unknown

Not on your lists

comp(28215..28313)
DNA (99bp) protein (33aa)

This feature has no annotations

rifoxya1_full_scaffold_148_26
unknown

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comp(28470..28748)
DNA (279bp) protein (93aa)

This feature has no annotations

rifoxya1_full_scaffold_148_27
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(28901..30487)
DNA (1587bp) protein (529aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=CG_Desulfarul_01
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDF8_9DELT rbh
rifoxya1_full_scaffold_148_28
unknown

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comp(30591..30725)
DNA (135bp) protein (45aa)

This feature has no annotations

rifoxya1_full_scaffold_148_29
unknown

Not on your lists

comp(30801..31379)
DNA (579bp) protein (193aa)

This feature has no annotations

rifoxya1_full_scaffold_148_30
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(31719..32339)
DNA (621bp) protein (207aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=CG_Pacearch_03
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] alias=gwa2_scaffold_63_100 id=5040536 tax=GW2011_AR5 species=Acidianus hospitalis genus=Acidianus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota organism_desc=gwa2_.48_18
phage SPO1 DNA polymerase-like protein
Displaying items 1-30 of 106 in total

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