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gwf2_scaffold_336

Alias: PER_GWF2_39_17_6

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Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_336_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

1..1128
DNA (1128bp) protein (376aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=2 to=66)
gwf2_scaffold_336_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

1146..5315
DNA (4170bp) protein (1390aa)
N-acetylmuramoyl-L-alanine amidase domain Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=41 to=62 evalue=NA)
seg (db=Seg db_id=seg from=881 to=894)
(db=HMMPfam db_id=PF01464 from=675 to=779 evalue=1.1e-07 interpro_id=IPR008258 interpro_description=Lytic transglycosylase-like, catalytic)
gwf2_scaffold_336_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

5388..8636
DNA (3249bp) protein (1083aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DU8_STIAD
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF03734 from=258 to=400 evalue=0.00022 interpro_id=IPR005490 interpro_description=L,D-transpeptidase catalytic domain GO=Molecular Function: transferase activity (GO:0016740))
gwf2_scaffold_336_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8644..9864)
DNA (1221bp) protein (407aa)
Peptidase M23B n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PB4_SOLUE
peptidase M23B Tax=PER_GWF2_39_17
peptidase M23B
seg (db=Seg db_id=seg from=272 to=286)
gwf2_scaffold_336_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(10370..11509)
DNA (1140bp) protein (380aa)
malic protein NAD-binding protein; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=PER_GWF2_39_17
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=4 Tax=Clostridiales RepID=B0P5B2_9CLOT rbh
seg (db=Seg db_id=seg from=74 to=87)
gwf2_scaffold_336_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(11540..11749)
DNA (210bp) protein (70aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=37 to=52)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
gwf2_scaffold_336_7
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(11824..13188)
DNA (1365bp) protein (455aa)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
peptidase S8/S53 subtilisin kexin sedolisin Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_336_8
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(13241..14020)
DNA (780bp) protein (260aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=2 Tax=Dictyoglomus RepID=B5YDR0_DICT6
prolipoprotein diacylglyceryl transferase Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwf2_scaffold_336_9
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(14055..15395)
DNA (1341bp) protein (447aa)
Histidyl-tRNA synthetase, histidyl-tRNA synthetase {ECO:0000313|EMBL:KKR08404.1}; EC=6.1.1.21 {ECO:0000313|EMBL:KKR08404.1};; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibac
Histidine--tRNA ligase n=7 Tax=Dehalococcoides mccartyi RepID=SYH_DEHE1 rbh
histidyl-tRNA synthetase
hisS: histidyl-tRNA synthetase (db=HMMTigr db_id=TIGR00442 from=14 to=419 evalue=1.1e-182 interpro_id=IPR015807 interpro_description=Histidyl-tRNA synthetase, class IIa, subgroup GO=Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
gwf2_scaffold_336_10
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

15549..17369
DNA (1821bp) protein (607aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=487 to=515 evalue=NA)
seg (db=Seg db_id=seg from=90 to=101)
gwf2_scaffold_336_11
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(17337..18314)
DNA (978bp) protein (326aa)
metalloendopeptidase, glycoprotease family; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=PER_GWF2_39_17
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=2 Tax=Bacillus coagulans RepID=F7YZN7_BACC6 rbh
glycoprotease family metalloendopeptidase
(db=HMMPfam db_id=PF00814 from=23 to=308 evalue=1.7e-91 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
gwf2_scaffold_336_12
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18314..18445)
DNA (132bp) protein (44aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=19 to=30)
gwf2_scaffold_336_13
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18581..18787)
DNA (207bp) protein (69aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=32 to=67)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=7.0)
gwf2_scaffold_336_14
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

18941..20263
DNA (1323bp) protein (441aa)
metal dependent phosphohydrolase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744BED rbh
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:KKR26350.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
HDIG: uncharacterized domain HDIG (db=HMMTigr db_id=TIGR00277 from=232 to=315 evalue=0.00021 interpro_id=IPR006675 interpro_description=Uncharacterised domain HDIG)
gwf2_scaffold_336_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(20286..21053)
DNA (768bp) protein (256aa)
pyruvate formate-lyase activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=PER_GWF2_39_17
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme n=1 Tax=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) RepID=A6VLU5_ACTSZ
RADICAL_ACTIVATING (db=PatternScan db_id=PS01087 from=27 to=48 evalue=0.0 interpro_id=IPR001989 interpro_description=Radical-activating enzyme, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_336_16
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

21096..21194
DNA (99bp) protein (33aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_17
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

21149..21430
DNA (282bp) protein (94aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(21427..23739)
DNA (2313bp) protein (771aa)
formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54] Tax=PER_GWF2_39_17
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVT9_MAHA5 rbh
GLY_RADICAL_1 (db=PatternScan db_id=PS00850 from=740 to=748 evalue=0.0 interpro_id=IPR019777 interpro_description=Formate C-acetyltransferase glycine radical, conserved site)
gwf2_scaffold_336_19
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(23812..24999)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WXR5_CYAA5
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_336_20
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

25336..27411
DNA (2076bp) protein (692aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=PER_GWF2_39_17
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUW2_METHD rbh
vacuolar-type H(+)-translocating pyrophosphatase
V_PPase: V-type H(+)-translocating pyrophosp (db=HMMTigr db_id=TIGR01104 from=3 to=691 evalue=0.0 interpro_id=IPR004131 interpro_description=Pyrophosphate-energised proton pump GO=Molecular Function: inorganic diphosphatase activity (GO:0004427), Molecular Function: hydrogen-translocating pyrophosphatase activity (GO:0009678), Biological Process: proton transport (GO:0015992), Cellular Component: membrane (GO:0016020))
gwf2_scaffold_336_21
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

27441..27704
DNA (264bp) protein (88aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_22
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(27709..28461)
DNA (753bp) protein (251aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_23
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists


comp(28533..29189)
DNA (657bp) protein (219aa)
50S ribosomal protein L25 n=2 Tax=Staphylococcus warneri RepID=F3SNI3_STAWA
Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5, large subunit ribosomal protein L25 {ECO:0000313|EMBL:KKR25988.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
seg (db=Seg db_id=seg from=180 to=209)
gwf2_scaffold_336_24
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

29319..29534
DNA (216bp) protein (72aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_336_25
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

29565..30140
DNA (576bp) protein (192aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:KKR08420.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
Iron-sulfur cluster assembly accessory protein
SP0561-like (db=superfamily db_id=SSF140683 from=5 to=78 evalue=2.0e-09)
gwf2_scaffold_336_26
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(30099..30389)
DNA (291bp) protein (97aa)
TrpR like protein, YerC/YecD n=11 Tax=Xanthomonadaceae RepID=B4STN5_STRM5
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
TrpR-like (db=superfamily db_id=SSF48295 from=3 to=94 evalue=1.9e-21 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
gwf2_scaffold_336_27
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

30483..31898
DNA (1416bp) protein (472aa)
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=PER_GWF2_39_17
anthranilate synthase subunit I (EC:4.1.3.27)
Anthranilate synthase, component I n=6 Tax=Dehalococcoides mccartyi RepID=A5FPM0_DEHSB rbh
coiled-coil (db=Coil db_id=coil from=297 to=318 evalue=NA)
gwf2_scaffold_336_28
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

31921..32505
DNA (585bp) protein (195aa)
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=PER_GWF2_39_17
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II (EC:4.1.3.27)
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q096N7_STIAD
seg (db=Seg db_id=seg from=70 to=81)
gwf2_scaffold_336_29
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

32505..33488
DNA (984bp) protein (328aa)
Anthranilate phosphoribosyltransferase, anthranilate phosphoribosyltransferase {ECO:0000313|EMBL:KKR08424.1}; EC=2.4.2.18 {ECO:0000313|EMBL:KKR08424.1};; TaxID=1619067 species="Bacteria; Peregrinibact
Anthranilate phosphoribosyltransferase n=6 Tax=Dehalococcoides mccartyi RepID=TRPD_DEHE1
anthranilate phosphoribosyltransferase
no description (db=Gene3D db_id=G3DSA:3.40.1030.10 from=58 to=325 evalue=1.6e-79 interpro_id=IPR000312 interpro_description=Glycosyl transferase, family 3 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757))
gwf2_scaffold_336_30
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

33485..34237
DNA (753bp) protein (251aa)
Indole-3-glycerol phosphate synthase (IGPS) / N-(5'-phospho-ribosyl)anthranilate isomerase (PRAI) n=1 Tax=Buchnera aphidicola (Cinara tujafilina) RepID=F7WZA8_9ENTR
indole-3-glycerol phosphate synthase/ N-(5'-phospho-ribosyl)anthranilate isomerase Tax=PER_GWF2_39_17
trpc; indole-3-glycerol phosphate synthase/N-(5'-phospho-ribosyl)anthranilate isomerase
seg (db=Seg db_id=seg from=125 to=143)
Displaying items 1-30 of 85 in total

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