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gwf2_scaffold_501

Alias: PER_GWF2_39_17_7

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_501_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(120..440)
DNA (321bp) protein (107aa)
Thioredoxin n=2 Tax=Thermaerobacter RepID=E6SLC1_THEM7
Thioredoxin, thioredoxin 1 {ECO:0000313|EMBL:KKR08326.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
thioredoxin
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=23 to=41 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
gwf2_scaffold_501_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

611..4024
DNA (3414bp) protein (1138aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C735_SPHTD
N-acetylmuramoyl-L-alanine amidase family 2 protein Tax=PER_GWF2_39_17
N-acetylmuramoyl-L-alanine amidase family 2 protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_501_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

4067..4651
DNA (585bp) protein (195aa)
HAD-superfamily hydrolase (EC:5.4.2.6)
Putative uncharacterized protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PYC0_9BACT
peptidase M22 glycoprotease Tax=PER_GWF2_39_17
(db=HMMPfam db_id=PF00814 from=31 to=106 evalue=2.4e-13 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
gwf2_scaffold_501_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

4830..5069
DNA (240bp) protein (80aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=23 to=33)
gwf2_scaffold_501_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

5082..5741
DNA (660bp) protein (220aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=PER_GWF2_39_17
Ribosomal RNA small subunit methyltransferase I n=5 Tax=Arthrospira RepID=B5W176_SPIMA
putative S-adenosylmethionine-dependent methyltransferase
RSMI (db=PatternScan db_id=PS01296 from=79 to=90 evalue=0.0 interpro_id=IPR018063 interpro_description=SAM-dependent methyltransferase RsmI, conserved site GO=Molecular Function: methyltransferase activity (GO:0008168))
gwf2_scaffold_501_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(5935..8418)
DNA (2484bp) protein (828aa)
Leucyl-tRNA synthetase, leucyl-tRNA synthetase {ECO:0000313|EMBL:KKR08331.1}; EC=6.1.1.4 {ECO:0000313|EMBL:KKR08331.1};; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
Leucine--tRNA ligase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMZ1_IGNAJ rbh
leucyl-tRNA synthetase
leuS_bact: leucyl-tRNA synthetase (db=HMMTigr db_id=TIGR00396 from=20 to=827 evalue=0.0 interpro_id=IPR002302 interpro_description=Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: leucine-tRNA ligase activity (GO:0004823), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: leucyl-tRNA aminoacylation (GO:0006429))
gwf2_scaffold_501_7
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8537..8641)
DNA (105bp) protein (35aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_501_8
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

8860..9300
DNA (441bp) protein (147aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV39_9BACT
cyclic nucleotide-binding protein Tax=PER_GWF2_39_17
cAMP-binding protein
CNMP_BINDING_2 (db=PatternScan db_id=PS00889 from=83 to=100 evalue=0.0 interpro_id=IPR018488 interpro_description=Cyclic nucleotide-binding, conserved site)
gwf2_scaffold_501_9
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(9366..10322)
DNA (957bp) protein (319aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=81 to=92)
gwf2_scaffold_501_10
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

10416..11336
DNA (921bp) protein (307aa)
Mg/Co transporter n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZA1_9CLOT
Mg2 transporter protein CorA family protein; K03284 magnesium transporter Tax=PER_GWF2_39_17
yfjQ; putative metal ion transporter YfjQ
transmembrane_regions (db=TMHMM db_id=tmhmm from=249 to=271)
gwf2_scaffold_501_11
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists


11502..11765
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RS15_CARHZ
30S ribosomal protein S15, small subunit ribosomal protein S15 {ECO:0000313|EMBL:KKR23461.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6
rpsO; 30S ribosomal protein S15
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=37 to=67 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_501_12
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists


11901..14048
DNA (2148bp) protein (716aa)
Polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKR23462.1}; EC=2.7.7.8 {ECO:0000313|EMBL:KKR23462.1};; TaxID=1619064 species="Bacteria; Peregrin
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVF6_9CLOT rbh
polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=10 to=706 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402))
gwf2_scaffold_501_13
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(14085..16973)
DNA (2889bp) protein (963aa)
Heavy metal translocating P-type ATPase, Cu2+-exporting ATPase {ECO:0000313|EMBL:KKR08338.1}; EC=3.6.3.4 {ECO:0000313|EMBL:KKR08338.1};; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="P
Heavy metal translocating P-type ATPase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZW57_MAHA5 rbh
hypothetical protein
ATPASE_E1_E2 (db=PatternScan db_id=PS00154 from=619 to=625 evalue=0.0 interpro_id=IPR018303 interpro_description=ATPase, P-type phosphorylation site)
gwf2_scaffold_501_14
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(17003..17218)
DNA (216bp) protein (72aa)
Heavy metal-associated domain, HMA Tax=PER_GWF2_39_17
(db=HMMPfam db_id=PF00403 from=6 to=65 evalue=1.9e-05 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=71 evalue=3.2e-09 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA_2 (db=ProfileScan db_id=PS50846 from=3 to=71 evalue=10.528 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
gwf2_scaffold_501_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(17231..18577)
DNA (1347bp) protein (449aa)
Heavy metal transport/detoxification protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EJD8_CLOPA
heavy metal transport/detoxification protein Tax=PER_GWF2_39_17
hypothetical protein
HMA_1 (db=PatternScan db_id=PS01047 from=8 to=37 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
gwf2_scaffold_501_16
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18582..18857)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LJA7_THEM4
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF02583 from=6 to=84 evalue=1.0e-17 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
gwf2_scaffold_501_17
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

19618..21150
DNA (1533bp) protein (511aa)
Putative phosphate permease n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTZ8_9BACT rbh
phosphate permease Tax=PER_GWF2_39_17
sodium/phosphate symporter superfamily protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwf2_scaffold_501_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

21628..22149
DNA (522bp) protein (174aa)
Vitamin K epoxide reductase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4F9_ACIC5
vitamin K epoxide reductase Tax=PER_GWF2_39_17
Vitamin K epoxide reductase
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwf2_scaffold_501_19
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

22177..22617
DNA (441bp) protein (147aa)
Glutaredoxin-like protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LJ45_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKR08344.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
hypothetical protein
seg (db=Seg db_id=seg from=12 to=22)
gwf2_scaffold_501_20
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

22614..22739
DNA (126bp) protein (42aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_501_21
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(22770..23588)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PKD2_9ZZZZ
Putative uncharacterized protein Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=6 to=20)
gwf2_scaffold_501_22
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

23766..23972
DNA (207bp) protein (69aa)
Ribosomal protein S21 Tax=PER_GWF2_39_17
(db=HMMPfam db_id=PF01165 from=4 to=59 evalue=0.00012 interpro_id=IPR001911 interpro_description=Ribosomal protein S21 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
seg (db=Seg db_id=seg from=26 to=41)
gwf2_scaffold_501_23
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

23981..24832
DNA (852bp) protein (284aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=PER_GWF2_39_17
Release factor glutamine methyltransferase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0Z0_DEHLB
protein-(glutamine-N5) methyltransferase
seg (db=Seg db_id=seg from=20 to=36)
gwf2_scaffold_501_24
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

24861..25925
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCP5_THET1 rbh
Peptide chain release factor 1, peptide chain release factor 1 {ECO:0000313|EMBL:KKR08349.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_1
peptide chain release factor 1
RF_PROK_I (db=PatternScan db_id=PS00745 from=226 to=242 evalue=0.0 interpro_id=IPR000352 interpro_description=Peptide chain release factor class I/class II GO=Molecular Function: translation release factor activity (GO:0003747), Biological Process: translational termination (GO:0006415))
gwf2_scaffold_501_25
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(25915..27450)
DNA (1536bp) protein (512aa)
L-aspartate oxidase, L-aspartate oxidase {ECO:0000313|EMBL:KKR25499.1}; EC=1.4.3.16 {ECO:0000313|EMBL:KKR25499.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bact
L-aspartate oxidase n=1 Tax=Paenibacillus sp. HGF7 RepID=F5LD80_9BACL rbh
L-aspartate oxidase
coiled-coil (db=Coil db_id=coil from=439 to=460 evalue=NA)
gwf2_scaffold_501_26
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(27447..27953)
DNA (507bp) protein (169aa)
aroKB; shikimate kinase (EC:2.7.1.71 4.2.3.4); K13829 shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] Tax=PER_GWF2_39_17
Shikimate kinase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJU3_DESTT
shikimate kinase
seg (db=Seg db_id=seg from=127 to=142)
gwf2_scaffold_501_27
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(27957..29216)
DNA (1260bp) protein (420aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=PER_GWF2_39_17
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z568_DESAT rbh
aroA: 3-phosphoshikimate 1-carboxyvinyltrans (db=HMMTigr db_id=TIGR01356 from=3 to=412 evalue=1.5e-147 interpro_id=IPR006264 interpro_description=3-phosphoshikimate 1-carboxyvinyltransferase GO=Molecular Function: 3-phosphoshikimate 1-carboxyvinyltransferase activity (GO:0003866))
gwf2_scaffold_501_28
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(29314..30405)
DNA (1092bp) protein (364aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=PER_GWF2_39_17
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6P6_DESAT
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
gwf2_scaffold_501_29
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(30448..31461)
DNA (1014bp) protein (338aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase, 3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:KKR08354.1}; EC=2.5.1.54 {ECO:0000313|EMBL:KKR08354.1};; TaxID=1619067 species="Bacteria; Peregrini
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E3X8_FLESM rbh
seg (db=Seg db_id=seg from=141 to=151)
gwf2_scaffold_501_30
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

32075..33055
DNA (981bp) protein (327aa)
Cysteine synthase, cystathionine beta-synthase {ECO:0000313|EMBL:KKR08355.1}; EC=4.2.1.22 {ECO:0000313|EMBL:KKR08355.1};; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteri
cysK; Cysteine synthase (EC:4.2.1.22)
cystathionine beta-synthase n=1 Tax=Diplorickettsia massiliensis 20B RepID=UPI00029A7ED9 rbh
seg (db=Seg db_id=seg from=178 to=190)
Displaying items 1-30 of 60 in total

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