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gwf2_scaffold_913

Alias: PER_GWF2_39_17_10

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Displaying items 61-71 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_913_61
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(74829..75890)
DNA (1062bp) protein (354aa)
RNA polymerase sigma factor n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Y7_9FIRM
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF05066 from=224 to=288 evalue=0.00022 interpro_id=IPR007759 interpro_description=DNA-directed RNA polymerase delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription, DNA-dependent (GO:0006351))
gwf2_scaffold_913_62
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

76063..79752
DNA (3690bp) protein (1230aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=150 to=174)
gwf2_scaffold_913_63
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

79757..79993
DNA (237bp) protein (79aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_913_64
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(79988..81616)
DNA (1629bp) protein (543aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N125_ANATU rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR08019.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
hypothetical protein
seg (db=Seg db_id=seg from=394 to=409)
gwf2_scaffold_913_65
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

81634..83178
DNA (1545bp) protein (515aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=PER_GWF2_39_17
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSE6_CELLD
seg (db=Seg db_id=seg from=139 to=152)
gwf2_scaffold_913_66
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(83150..84007)
DNA (858bp) protein (286aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=PER_GWF2_39_17
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DNP7_HALPG
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=260 to=284 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
gwf2_scaffold_913_67
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(84035..84325)
DNA (291bp) protein (97aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=85 to=96)
gwf2_scaffold_913_68
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(84429..85868)
DNA (1440bp) protein (480aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=PER_GWF2_39_17
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GATB_CARHZ rbh
GATB (db=PatternScan db_id=PS01234 from=144 to=158 evalue=0.0 interpro_id=IPR017958 interpro_description=Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
gwf2_scaffold_913_69
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(85899..86483)
DNA (585bp) protein (195aa)
methylglyoxal synthase; K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=PER_GWF2_39_17
Methylglyoxal synthase n=1 Tax=Halanaerobium sp. (strain sapolanicus) RepID=E4RIU8_HALSL
methylglyoxal synthase
(db=HMMPfam db_id=PF01121 from=9 to=170 evalue=1.1e-29 interpro_id=IPR001977 interpro_description=Dephospho-CoA kinase GO=Molecular Function: dephospho-CoA kinase activity (GO:0004140), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
gwf2_scaffold_913_70
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(86507..86905)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTB2_9BACT
Putative uncharacterized protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=22)
gwf2_scaffold_913_71
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(86909..87475)
DNA (567bp) protein (189aa)
transmembrane_regions Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
Displaying items 61-71 of 71 in total

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