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13_1_40cm_scaffold_12

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12_trna_1
unknown

Not on your lists

comp(4..77)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_12_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

158..1057
DNA (900bp) protein (300aa)
Hypothetical membrane protein id=4520660 bin=GWC2_Ignavibacteria_56_12 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical membrane protein
13_1_40cm_scaffold_12_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1071..1991
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC60_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_12_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2017..2868
DNA (852bp) protein (284aa)
ilvA; serine/threonine dehydratase (EC:4.3.1.19) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Threo-3-hydroxyaspartate ammonia-lyase (EC:4.3.1.16)
serine/threonine dehydratase n=1 Tax=Fischerella muscicola RepID=UPI0002EEAEAD
13_1_40cm_scaffold_12_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2853..3980
DNA (1128bp) protein (376aa)
5'-nucleotidase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN53_9DELT
5'-nucleotidase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
5`-nucleotidase
13_1_40cm_scaffold_12_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4381..5103)
DNA (723bp) protein (241aa)
Ferric reductase domain protein transmembrane component, N-terminal domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PH5_SOLUE
ferric reductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ferric reductase domain-containing protein
13_1_40cm_scaffold_12_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5140..6111)
DNA (972bp) protein (324aa)
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RF35_9RHOO
Putative sulfite oxidase subunit YedY; K07147 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
sulfite oxidase subunit YedY
13_1_40cm_scaffold_12_7
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6101..6778)
DNA (678bp) protein (226aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Moorea producens 3L RepID=F4XP08_9CYAN
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:EGJ33779.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea prod
glycosyl transferase family 2
13_1_40cm_scaffold_12_8
unknown

Not on your lists

comp(7135..7440)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_12_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7766..8494
DNA (729bp) protein (243aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6T2_NOVAD
response regulator/sensory box histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_scaffold_12_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8540..10063
DNA (1524bp) protein (508aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Fis family transcriptional regulator id=12555999 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
13_1_40cm_scaffold_12_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10324..11856
DNA (1533bp) protein (511aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=3866438 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Fis family transcriptional regulator
13_1_40cm_scaffold_12_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11859..12341
DNA (483bp) protein (161aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_scaffold_12_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12350..13600
DNA (1251bp) protein (417aa)
Cellulose biosynthesis (CelD)-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_scaffold_12_14
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13664..14272
DNA (609bp) protein (203aa)
Transcription termination/antitermination protein nusG n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVW1_SYNAS
NusG antitermination factor Tax=RBG_13_Deltaproteobacteria_58_19_curated
transcription antitermination protein
13_1_40cm_scaffold_12_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14281..15456
DNA (1176bp) protein (392aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_12_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

15453..16073
DNA (621bp) protein (207aa)
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Putative Polysaccharide export protein id=4972193 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
polysaccharide biosynthesis/export protein
13_1_40cm_scaffold_12_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

16084..17703
DNA (1620bp) protein (540aa)
Chain length determinant protein, Wzz-like protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVT5_SYNAS
chain length determinant protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
chain length determinant protein
13_1_40cm_scaffold_12_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17710..18417
DNA (708bp) protein (236aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q098D6_STIAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_scaffold_12_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18448..19731
DNA (1284bp) protein (428aa)
Bacterial sugar transferase domain protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A8Q9_9ZZZZ
sugar transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_12_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

19737..21101
DNA (1365bp) protein (455aa)
wzy family polymerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
wzy family polymerase id=12557456 bin=CNBR_ACIDO species=Marichromatium purpuratum genus=Marichromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-antigen polymerase
13_1_40cm_scaffold_12_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21098..23476
DNA (2379bp) protein (793aa)
Cellulose biosynthesis (CelD)-like protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI87_9DELT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_12_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

23479..24627
DNA (1149bp) protein (383aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL6_ANADF
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_40cm_scaffold_12_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

24624..25733
DNA (1110bp) protein (370aa)
Cellulose biosynthesis (CelD)-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL80_ANADE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cellulose biosynthesis (CelD)-like protein
13_1_40cm_scaffold_12_24
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

25723..26820
DNA (1098bp) protein (366aa)
Polysaccharide deacetylase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q7R1_9DELT
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide deacetylase
13_1_40cm_scaffold_12_25
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

26817..28307
DNA (1491bp) protein (497aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL1_ANADF
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_scaffold_12_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

28342..30258
DNA (1917bp) protein (639aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLR4_SINAD
asparagine synthase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_scaffold_12_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

30263..33169
DNA (2907bp) protein (969aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative Glycosyl transferase, family 2 id=2882460 bin=GWF2_OP3_43_52 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
family 2 glycosyl transferase
13_1_40cm_scaffold_12_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(33112..35187)
DNA (2076bp) protein (692aa)
glycosyl hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_scaffold_12_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

35600..36787
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CA46F
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
glycosyl transferase family 1
Displaying items 1-30 of 33 in total

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