ggKbase home page

SR1-18-Sp65_coassembly_scaffold_9241

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_9241_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1..918
DNA (918bp) protein (306aa)
Site-specific DNA-methyltransferase (Cytosine-specific) n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGF2_ROSCS
cytosine-specific DNA-methyltransferase
Site-specific DNA-methyltransferase (Cytosine-specific) {ECO:0000313|EMBL:ABU56539.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SR1-18-Sp65_coassembly_scaffold_9241_2
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

915..1268
DNA (354bp) protein (118aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGF3_ROSCS
Tax=CG_Arma_02
SR1-18-Sp65_coassembly_scaffold_9241_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

1374..2009
DNA (636bp) protein (212aa)
Putative type II restriction enzyme n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3G2_CALAS
putative type II restriction enzyme
Putative type II restriction enzyme {ECO:0000313|EMBL:BAL99799.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_9241_4
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

2183..2647
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=1891891 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_9241_5

Not on your lists

2917..3456
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMC4_9CHLR
Marine sediment metagenome DNA, contig: S03H2_L00103 {ECO:0000313|EMBL:GAH27686.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_9241_6
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


3468..3665
DNA (198bp) protein (66aa)
50S ribosomal protein L32 id=3809253 bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rpmF; 50S ribosomal protein L32
Tax=CG_Anaero_03
SR1-18-Sp65_coassembly_scaffold_9241_7
R_OD1_58_14, Parcubacteria, Bacteria

Not on your lists

4263..5198
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SMY0_9CHLR
malonyl CoA-acyl carrier protein transacylase
Tax=RIFCSPLOWO2_01_FULL_OD1_58_14_curated
SR1-18-Sp65_coassembly_scaffold_9241_8
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

5195..5938
DNA (744bp) protein (248aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-[acyl carrier protein] reductase n=3 Tax=Geobacillus RepID=Q5L0Q5_GEOKA
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_9241_9
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

6010..6372
DNA (363bp) protein (121aa)
hypothetical protein id=1245092 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_9241_10
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

6443..6898
DNA (456bp) protein (152aa)
N utilization substance protein B homolog n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4X5_ANATU id=1245091 bin=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nusB; antitermination protein NusB
Tax=RBG_16_Chloroflexi_64_43_curated
SR1-18-Sp65_coassembly_scaffold_9241_11
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6898..7215
DNA (318bp) protein (106aa)
Sec-independent protein translocase protein TatA n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GRU5_SELRL
tatA; putative Sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
SR1-18-Sp65_coassembly_scaffold_9241_12
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7317..8525
DNA (1209bp) protein (403aa)
Sec-independent protein translocase protein TatC n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N519_ANATU
tatC; Sec-independent protein translocase protein TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
SR1-18-Sp65_coassembly_scaffold_9241_13
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8684..10000
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4I9_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ63353.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
SR1-18-Sp65_coassembly_scaffold_9241_14
unknown

Not on your lists

10092..10421
DNA (330bp) protein (110aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_9241_15
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10851..11993)
DNA (1143bp) protein (381aa)
2-alkenal reductase {ECO:0000313|EMBL:ACL25773.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ACL25773.1};; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
2-alkenal reductase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G640_CHLAD
2-alkenal reductase
SR1-18-Sp65_coassembly_scaffold_9241_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12204..13136)
DNA (933bp) protein (311aa)
Polysaccharide deacetylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5P7_SPHTD
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACZ39449.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SR1-18-Sp65_coassembly_scaffold_9241_17
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

13188..13769
DNA (582bp) protein (194aa)
Hypothetical membrane protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N6D2_ANATU
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
SR1-18-Sp65_coassembly_scaffold_9241_18
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(14539..16071)
DNA (1533bp) protein (511aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
atm:ANT_28730 two-component sensor histidine kinase id=1246321 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_9241_19
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16209..16994)
DNA (786bp) protein (262aa)
OmpR family two-component response regulator id=2466130 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
putative OmpR family two-component response regulator
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_9241_20
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17015..20032)
DNA (3018bp) protein (1006aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1U4_CALAS
hypothetical protein
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_9241_21

Not on your lists

comp(20227..21084)
DNA (858bp) protein (286aa)
Protein kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTV9_ROSS1
Marine sediment metagenome DNA, contig: S01H1_S33501 {ECO:0000313|EMBL:GAG34808.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein kinase
SR1-18-Sp65_coassembly_scaffold_9241_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21096..21425)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00030CD7E9
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SR1-18-Sp65_coassembly_scaffold_9241_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(21550..22842)
DNA (1293bp) protein (431aa)
putative D-alanine--D-alanine ligase (EC:6.3.2.4)
Putative D-alanine--D-alanine ligase id=1761496 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_9241_24
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(22916..23590)
DNA (675bp) protein (225aa)
TrkA-N domain protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEZ8_9CHLR
TrkA-N domain protein {ECO:0000313|EMBL:CCF83260.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
TrkA-N domain-containing protein
SR1-18-Sp65_coassembly_scaffold_9241_25
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(23679..24077)
DNA (399bp) protein (133aa)
TrkA-N domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL8_THET1
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ACZ41724.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SR1-18-Sp65_coassembly_scaffold_9241_26

Not on your lists

comp(24565..25017)
DNA (453bp) protein (151aa)
Na+/H+ antiporter C-terminal domain/universal stress protein-like protein n=2 Tax=Dehalococcoides mccartyi RepID=D2BJZ4_DEHSV
Marine sediment metagenome DNA, contig: S01H4_S07705 {ECO:0000313|EMBL:GAH01308.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
universal stress protein
SR1-18-Sp65_coassembly_scaffold_9241_27
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

25743..27218
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G6L2_CHLAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL23949.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SR1-18-Sp65_coassembly_scaffold_9241_28
unknown

Not on your lists

27362..27466
DNA (105bp) protein (35aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_9241_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

27784..28839
DNA (1056bp) protein (352aa)
Protein TolB n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NEM0_DESTT
tolB; tol-pal system, periplasmic component TolB
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SR1-18-Sp65_coassembly_scaffold_9241_30
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

29025..30365
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY14_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
Displaying items 1-30 of 35 in total

View Taxonomy