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SR1-18-Sp65_coassembly_scaffold_2335

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_2335_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1..876)
DNA (876bp) protein (292aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0J6_ROSS1
carbamoyl-phosphate synthase small subunit
SR1-18-Sp65_coassembly_scaffold_2335_2
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

1002..2369
DNA (1368bp) protein (456aa)
Adenylosuccinate lyase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SCY0_9CHLR
purB; adenylosuccinate lyase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_2335_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

2498..3571
DNA (1074bp) protein (358aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00035E2E74
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_2335_4
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3634..4299)
DNA (666bp) protein (222aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4A6_OCEP5
haloacid dehalogenase domain protein hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ADR36191.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
SR1-18-Sp65_coassembly_scaffold_2335_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4479..5387
DNA (909bp) protein (303aa)
PKD domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P1V8_9CLOT
PKD domain protein {ECO:0000313|EMBL:CDC03942.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
copper-binding protein
SR1-18-Sp65_coassembly_scaffold_2335_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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5490..5873
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C446_SPHTD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACZ39013.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SR1-18-Sp65_coassembly_scaffold_2335_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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6103..7404
DNA (1302bp) protein (434aa)
30S ribosomal protein S1 n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZV3_CALAS
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:BAL98540.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_2335_8
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

8094..10604
DNA (2511bp) protein (837aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3Y8_CALAS
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_2335_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10980..11558
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GYD9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97225.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SR1-18-Sp65_coassembly_scaffold_2335_10
unknown

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comp(11678..12355)
DNA (678bp) protein (226aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_2335_11
unknown

Not on your lists

comp(12513..13370)
DNA (858bp) protein (286aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_2335_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13528..17502)
DNA (3975bp) protein (1325aa)
Glycosyl hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A7_SOLUE
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:ABJ84196.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR1-18-Sp65_coassembly_scaffold_2335_13
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17912..18079)
DNA (168bp) protein (56aa)
type ii site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FGG9_9EURY
Tax=RBG_16_Deltaproteobacteria_48_10_curated
SR1-18-Sp65_coassembly_scaffold_2335_14
Acidiplasma sp. MBA-1, Acidiplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(18097..19473)
DNA (1377bp) protein (459aa)
cytosine-N(4)-specific DNA-methyltransferase (EC:2.1.1.113)
Site-specific DNA-methyltransferase (Cytosine-N(4)-specific) n=1 Tax=Dehalococcoides sp. (strain GT) RepID=D3SK74_DEHSG
Uncharacterized protein {ECO:0000313|EMBL:KJE48567.1}; TaxID=1293648 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Acidiplasma.;" source="Acidiplasma sp. MBA-1.;"
SR1-18-Sp65_coassembly_scaffold_2335_15
Treponema vincentii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19476..20168)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Treponema vincentii F0403 RepID=S3LCG9_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:EPF47221.1}; TaxID=1125702 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema vincentii F0403.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_2335_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

20775..22157
DNA (1383bp) protein (461aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7V2_SPHTD
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SR1-18-Sp65_coassembly_scaffold_2335_17
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22189..22488)
DNA (300bp) protein (100aa)
CopG/DNA-binding domain-containing protein id=14624673 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=CSP1_8_Deltaproteobacteria
SR1-18-Sp65_coassembly_scaffold_2335_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(22485..22757)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002E0D20A
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
SR1-18-Sp65_coassembly_scaffold_2335_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(22999..24213)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1H7_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99114.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_2335_20
unknown

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comp(24234..24968)
DNA (735bp) protein (245aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_2335_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25358..25498)
DNA (141bp) protein (47aa)
Putative uncharacterized protein id=4359291 bin=GWC2_Geobacteraceae_55_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
FG-GAP repeat-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 21 items

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