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SR1-18-Sp65_coassembly_scaffold_130370

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_130370_1
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(296..1024)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037DEFC3
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130370_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(993..2690)
DNA (1698bp) protein (566aa)
60 kDa chaperonin n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1N8_THERP
groL; chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SR1-18-Sp65_coassembly_scaffold_130370_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2784..3086)
DNA (303bp) protein (101aa)
10 kDa chaperonin n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C214_SPHTD
chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SR1-18-Sp65_coassembly_scaffold_130370_4
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3610..10407
DNA (6798bp) protein (2266aa)
Putative two-component hybrid sensor and regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZF6_CALAS
putative two-component hybrid sensor and regulator
Tax=GWC2_Geobacteraceae_58_44_curated
SR1-18-Sp65_coassembly_scaffold_130370_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10491..11282
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8U3_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43962.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SR1-18-Sp65_coassembly_scaffold_130370_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11359..11565
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAC2
Uncharacterized protein {ECO:0000313|EMBL:KJK42230.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_130370_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

11520..12179
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8U3_MYXSD
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
SR1-18-Sp65_coassembly_scaffold_130370_8
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12301..18075
DNA (5775bp) protein (1925aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PAS sensor protein n=2 Tax=Chloroflexus RepID=A9WJE8_CHLAA
SR1-18-Sp65_coassembly_scaffold_130370_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18085..22536
DNA (4452bp) protein (1484aa)
multi-sensor hybrid histidine kinase id=14629663 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
diguanylate cyclase
Tax=BJP_IG2157_Anaerolineales_55_23
SR1-18-Sp65_coassembly_scaffold_130370_10
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

22570..23757
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIV2_MEISD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH65108.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
SR1-18-Sp65_coassembly_scaffold_130370_11
unknown

Not on your lists

comp(23790..23915)
DNA (126bp) protein (42aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_130370_12
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

23978..27901
DNA (3924bp) protein (1308aa)
signal transduction histidine kinase id=24426809 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PAS domain-containing protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
SR1-18-Sp65_coassembly_scaffold_130370_13
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..30828
DNA (2844bp) protein (948aa)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ALX7_PELPD
signal transduction histidine kinase NtrB
Tax=GWC2_Geobacteraceae_53_11_curated
SR1-18-Sp65_coassembly_scaffold_130370_14
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

31011..32246
DNA (1236bp) protein (412aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=3 Tax=Chloroflexus RepID=A9WC96_CHLAA
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_130370_15
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

32374..33420
DNA (1047bp) protein (349aa)
Hydroxymethylglutaryl-coenzyme A synthase family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1G4_ANATU
hydroxymethylglutaryl-coenzyme A synthase family protein
Tax=BJP_IG2157_Anaerolineales_55_23
SR1-18-Sp65_coassembly_scaffold_130370_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

33489..34646
DNA (1158bp) protein (386aa)
Thiolase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6F1_CALAS
thiolase family protein
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_130370_17
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

34716..35117
DNA (402bp) protein (134aa)
hypothetical protein; K07068 id=1245961 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_48_8_curated
SR1-18-Sp65_coassembly_scaffold_130370_18
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(35210..35584)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XL68_9CYAN
Tax=RBG_13_Planctomycetes_60_9_curated
SR1-18-Sp65_coassembly_scaffold_130370_19
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

35947..36633
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDU3_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ45131.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain PCC 7418) (Synechococcus sp. (strain PCC 7418)).;"
SR1-18-Sp65_coassembly_scaffold_130370_20
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

36665..37933
DNA (1269bp) protein (423aa)
Putative transcriptional regulator, GntR family n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUV9_ROSS1
GntR family transcriptional regulator
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:ABQ90412.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_130370_21
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

38512..39708
DNA (1197bp) protein (399aa)
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:ACZ40701.1}; EC=2.8.3.16 {ECO:0000313|EMBL:ACZ40701.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Formyl-CoA transferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA58_SPHTD
SR1-18-Sp65_coassembly_scaffold_130370_22
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

39825..41189
DNA (1365bp) protein (455aa)
Putative UDP-glucose 6-dehydrogenase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8J4_CALAS
putative UDP-glucose 6-dehydrogenase
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_130370_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

41262..41630
DNA (369bp) protein (123aa)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8J1_CALAS
acpS; holo-[acyl-carrier-protein] synthase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130370_24
unknown

Not on your lists

41700..42542
DNA (843bp) protein (281aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_130370_25
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(42978..43898)
DNA (921bp) protein (307aa)
transmembrane_regions 23..40 id=1245547 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_130370_26

Not on your lists

comp(43992..44411)
DNA (420bp) protein (140aa)
Transposase IS200 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5K5_SPHTD
Marine sediment metagenome DNA, contig: S01H1_S31814 {ECO:0000313|EMBL:GAG30806.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS200
SR1-18-Sp65_coassembly_scaffold_130370_27
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(44521..45348)
DNA (828bp) protein (276aa)
All4981 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YMF3_NOSS1
hypothetical protein
All4981 protein {ECO:0000313|EMBL:BAB76680.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
SR1-18-Sp65_coassembly_scaffold_130370_28
unknown

Not on your lists

comp(45296..45646)
DNA (351bp) protein (117aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_130370_29
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45786..48788)
DNA (3003bp) protein (1001aa)
N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1S2_THERP
N-acetylmuramoyl-L-alanine amidase domain-containing protein
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDX05081.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
SR1-18-Sp65_coassembly_scaffold_130370_30
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

comp(48826..49707)
DNA (882bp) protein (294aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJH9_9BACT
short-chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
Displaying items 1-30 of 72 in total

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