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SR1-18-Sp65_coassembly_scaffold_219404

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_219404_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZK8_ROSS1
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABQ92061.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_219404_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242..2095
DNA (1854bp) protein (618aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDP5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETX07425.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative DNA mismatch repair protein, MutS family
SR1-18-Sp65_coassembly_scaffold_219404_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

2383..2847
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I114_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98951.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_219404_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

3277..4260
DNA (984bp) protein (328aa)
Probable fructokinase-2 n=1 Tax=Arabidopsis thaliana RepID=SCRK2_ARATH
putative fructokinase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SR1-18-Sp65_coassembly_scaffold_219404_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

4581..6080
DNA (1500bp) protein (500aa)
Two-component sensor histidine kinase id=2140834 bin=GWD2_Chloroflexi_49_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Two-component system sensor kinase
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_219404_6
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

6089..6727
DNA (639bp) protein (213aa)
Two-component response regulator id=2140833 bin=GWD2_Chloroflexi_49_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
two component transcriptional regulator, LuxR family
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_219404_7
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

6758..7408
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IQX5_9GAMM
hypothetical protein
Tax=RBG_13_Chloroflexi_50_21_curated
SR1-18-Sp65_coassembly_scaffold_219404_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

7495..7722
DNA (228bp) protein (76aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
SR1-18-Sp65_coassembly_scaffold_219404_9
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7932..9440
DNA (1509bp) protein (503aa)
putative conserved protein (EC:2.1.1.72)
DNA methylase N-4/N-6 domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8P7_9CHLR
Tax=CG_Anaero_01
SR1-18-Sp65_coassembly_scaffold_219404_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

9505..10185
DNA (681bp) protein (227aa)
Putative methyltransferase (UbiE/COQ5 family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Y1_UNCMA
methyltransferase
Tax=CG_Dehalo_02
SR1-18-Sp65_coassembly_scaffold_219404_11
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

10428..11009
DNA (582bp) protein (194aa)
Phophatidylinositol-4-phosphate 5-kinase id=3981013 bin=GWF2_OP3_38_59 species=Fusobacterium nucleatum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
SR1-18-Sp65_coassembly_scaffold_219404_12
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

11403..11591
DNA (189bp) protein (63aa)
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_219404_13
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

11584..12723
DNA (1140bp) protein (380aa)
hydrogenase
Hydrogenase (NiFe) small subunit HydA id=4684745 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=GWC2_Nitrospirae_42_7_curated
SR1-18-Sp65_coassembly_scaffold_219404_14
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12727..14433
DNA (1707bp) protein (569aa)
Nickel-dependent hydrogenase, large subunit n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVP6_ROSS1
nickel-dependent hydrogenase large subunit
Nickel-dependent hydrogenase, large subunit {ECO:0000313|EMBL:ABQ90699.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_219404_15
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14544..15227
DNA (684bp) protein (228aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVP7_ROSS1
Ni/Fe-hydrogenase, b-type cytochrome subunit
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:ABQ90700.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_219404_16
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15413..15976
DNA (564bp) protein (188aa)
Hydrogenase expression/formation protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCD4_GEOUR
membrane protein
Membrane protein {ECO:0000313|EMBL:AJE04523.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
SR1-18-Sp65_coassembly_scaffold_219404_17
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16066..16488
DNA (423bp) protein (141aa)
hypothetical protein id=14430095 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=GWD2_Desulfuromonadales_61_12_curated
SR1-18-Sp65_coassembly_scaffold_219404_18
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16572..16934
DNA (363bp) protein (121aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5U6_ANATU
hypA; putative hydrogenase nickel incorporation protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
SR1-18-Sp65_coassembly_scaffold_219404_19
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

16915..17625
DNA (711bp) protein (237aa)
hypB; hydrogenase nickel incorporation protein HypB; K04652 hydrogenase nickel incorporation protein HypB id=1246478 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypB; hydrogenase nickel incorporation protein HypB
Tax=RBG_16_Chloroflexi_52_11_curated
SR1-18-Sp65_coassembly_scaffold_219404_20
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

17863..20619
DNA (2757bp) protein (919aa)
Hydrogenase maturation protein HypF id=1891734 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypF; hydrogenase maturation protein HypF
Tax=RBG_13_Chloroflexi_68_17_curated
SR1-18-Sp65_coassembly_scaffold_219404_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

20748..21023
DNA (276bp) protein (92aa)
Hydrogenase formation protein HypC n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5U9_ANATU id=1246480 bin=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypC; hydrogenase formation protein HypC
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_219404_22
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

21088..22194
DNA (1107bp) protein (369aa)
Hydrogenase formation protein HypD id=1705243 bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypD; hydrogenase formation protein HypD
Tax=RBG_16_Chloroflexi_47_49_curated
SR1-18-Sp65_coassembly_scaffold_219404_23
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

22601..23659
DNA (1059bp) protein (353aa)
Hydrogenase formation protein HypE id=1705242 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypE; hydrogenase formation protein HypE
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
SR1-18-Sp65_coassembly_scaffold_219404_24
unknown

Not on your lists

comp(23527..23850)
DNA (324bp) protein (108aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_219404_25
unknown

Not on your lists

23867..24079
DNA (213bp) protein (71aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_219404_26
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

24194..27838
DNA (3645bp) protein (1215aa)
Putative PAS/PAC sensor protein id=2242019 bin=GWB2_Chloroflexi_49_20 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative signaling protein
Tax=CG_Anaero_03
SR1-18-Sp65_coassembly_scaffold_219404_27
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

27877..28728
DNA (852bp) protein (284aa)
Putative transmembrane protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLS8_9GAMM
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SR1-18-Sp65_coassembly_scaffold_219404_28
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

28979..31171
DNA (2193bp) protein (731aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXH5_ROSS1
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABQ91328.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_219404_29
R_WWE3_40_23, WWE3, Bacteria

Not on your lists

comp(31413..32870)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI000360405D
Cna B domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
SR1-18-Sp65_coassembly_scaffold_219404_30
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

32955..34121
DNA (1167bp) protein (389aa)
MULE transposase, conserved domain protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NKF8_9BACL
MULE transposase
Tax=RBG_16_OP11_45_19_curated
Displaying items 1-30 of 31 in total

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