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SR1-18-Sp65_coassembly_scaffold_361919

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_361919_1
GWC2_OP11_46_7_partial, Microgenomates, Bacteria

Not on your lists

comp(28..384)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU46121.1}; TaxID=1618532 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC2_46_7.;"
hypothetical protein id=6423 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
SR1-18-Sp65_coassembly_scaffold_361919_trna_4
unknown

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comp(507..579)
DNA (73bp)
transferRNA Arg
SR1-18-Sp65_coassembly_scaffold_361919_trna_3
unknown

Not on your lists

comp(675..767)
DNA (93bp)
transferRNA Ser
SR1-18-Sp65_coassembly_scaffold_361919_trna_2
unknown

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comp(856..938)
DNA (83bp)
transferRNA Ser
SR1-18-Sp65_coassembly_scaffold_361919_2
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1055..2350)
DNA (1296bp) protein (432aa)
Glutamate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL6_THET1
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SR1-18-Sp65_coassembly_scaffold_361919_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2474..3730)
DNA (1257bp) protein (419aa)
Glutamate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL6_THET1
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SR1-18-Sp65_coassembly_scaffold_361919_4
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(3778..5244)
DNA (1467bp) protein (489aa)
dly:Dehly_1476 glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=1241077 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
aspartyl/glutamyl-tRNA amidotransferase subunit B
Tax=RBG_16_Chloroflexi_50_9_curated
SR1-18-Sp65_coassembly_scaffold_361919_5
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(5250..5729)
DNA (480bp) protein (160aa)
Putative nucleic acid-binding protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8L1P3_9SYNC
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_361919_6
unknown

Not on your lists

comp(6095..6532)
DNA (438bp) protein (146aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_361919_7
unknown

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7202..7522
DNA (321bp) protein (107aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_361919_8
Beggiatoa sp. SS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7431..7688)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. SS RepID=A7BN11_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN72073.1}; TaxID=422288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. SS.;"
SR1-18-Sp65_coassembly_scaffold_361919_9
unknown

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comp(7797..8024)
DNA (228bp) protein (76aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_361919_10
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8107..8373)
DNA (267bp) protein (89aa)
Similar to C-terminal part of Q1F5C4_9CHLR Addiction module toxin n=1 Tax=Microcystis aeruginosa PCC 9717 RepID=I4FPJ2_MICAE
Similar to C-terminal part of Q1F5C4_9CHLR Addiction module toxin {ECO:0000313|EMBL:CCH97567.1}; TaxID=1160286 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9717.;"
plasmid stabilization system-related protein
Type II toxin-antitoxin system RelE/ParE family toxin Jill Banfield (10/1/19)
SR1-18-Sp65_coassembly_scaffold_361919_11
unknown

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comp(8370..8609)
DNA (240bp) protein (80aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_361919_12
unknown

Not on your lists

comp(8606..8749)
DNA (144bp) protein (48aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_361919_13
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8746..9894)
DNA (1149bp) protein (383aa)
Uncharacterized protein {ECO:0000313|EMBL:KIH77889.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
Uncharacterized protein id=3440897 bin=GWC2_Pelobacter_58_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Possibly Spermidine synthase Jill Banfield (10/1/19)
SR1-18-Sp65_coassembly_scaffold_361919_14
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(9891..11240)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9F8_DESTA id=5223859 bin=16ft_combo_ws3_JS1 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=GWA2_RIF03_38_11_curated
Spermidine synthase Jill Banfield (10/1/19)
SR1-18-Sp65_coassembly_scaffold_361919_15
bacterium UASB270, Bacteria

Not on your lists

comp(11316..11597)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRQ9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:GAK60816.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
SR1-18-Sp65_coassembly_scaffold_361919_16
bacterium UASB270, Bacteria

Not on your lists

comp(11584..11868)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003753D14
Uncharacterized protein {ECO:0000313|EMBL:GAK60817.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_361919_17

Not on your lists

comp(11872..12102)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPB2_ROSS1
Aminotransferase class I and II {ECO:0000313|EMBL:AIA14234.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_361919_18
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12114..12455)
DNA (342bp) protein (114aa)
XisI protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZID8_ANACC
XisI protein
XisI protein {ECO:0000313|EMBL:AFZ58105.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
SR1-18-Sp65_coassembly_scaffold_361919_19
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12481..12678)
DNA (198bp) protein (66aa)
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_361919_20
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12688..12915)
DNA (228bp) protein (76aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X258_9NOST
putative periplasmic or secreted lipoprotein
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:AFZ26149.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
SR1-18-Sp65_coassembly_scaffold_361919_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(12915..13121)
DNA (207bp) protein (69aa)
hypothetical protein id=14425072 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
SR1-18-Sp65_coassembly_scaffold_361919_22

Not on your lists

comp(13235..14398)
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0K4_HERA2
Aminotransferase class I and II {ECO:0000313|EMBL:AIA14234.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
class I and II aminotransferase
SR1-18-Sp65_coassembly_scaffold_361919_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(14954..15937)
DNA (984bp) protein (328aa)
Nucleotidyl transferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URP0_ROSS1
nucleotidyl transferase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_361919_24
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(16336..16920)
DNA (585bp) protein (195aa)
Ribosomal RNA small subunit methyltransferase I id=4099771 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_361919_25
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17210..17944
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XKA5_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ35064.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
SR1-18-Sp65_coassembly_scaffold_361919_trna_1
unknown

Not on your lists

18080..18164
DNA (85bp)
transferRNA Leu
SR1-18-Sp65_coassembly_scaffold_361919_26
R_OD1_Falkowbacteria_40_23, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

18240..19145
DNA (906bp) protein (302aa)
DsbA oxidoreductase id=4800153 bin=GWC2_OD1_43_27 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DSBA oxidoreductase
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_40_23_curated
Thioredoxin 4 domain Jill Banfield (10/1/19)
Displaying items 1-30 of 131 in total

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