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SR1-18-Sp65_coassembly_scaffold_153298

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_153298_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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2..1474
DNA (1473bp) protein (491aa)
Alpha-2-macroglobulin domain-containing protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHV0_9CHLR
alpha-2-macroglobulin domain-containing protein
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_153298_2
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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1549..1893
DNA (345bp) protein (115aa)
Nucleotidyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUG7_METAC
nucleotidyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_153298_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2279..3376
DNA (1098bp) protein (366aa)
Radical SAM domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2N4_ACIC5
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACO32483.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SR1-18-Sp65_coassembly_scaffold_153298_4
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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3489..5093
DNA (1605bp) protein (535aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IES1_9CHLR
family 5 extracellular solute-binding protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_153298_5
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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5219..6148
DNA (930bp) protein (310aa)
Peptide ABC transporter, permease protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IES0_9CHLR
Peptide ABC transporter, permease protein {ECO:0000313|EMBL:EFO80319.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
binding-protein-dependent transport system inner membrane protein
SR1-18-Sp65_coassembly_scaffold_153298_6
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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6263..7228
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IER9_9CHLR
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFO80318.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
dipeptide/oligopeptide/nickel ABC transporter permease
SR1-18-Sp65_coassembly_scaffold_153298_7
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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7277..8440
DNA (1164bp) protein (388aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI07_ROSCS
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_153298_8
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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8919..11948
DNA (3030bp) protein (1010aa)
Adenylate/guanylate cyclase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:BAL59164.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
transcriptional activator
SR1-18-Sp65_coassembly_scaffold_153298_9

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12051..12350
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFE6_9FIRM
Marine sediment metagenome DNA, contig: S06H3_C00889 {ECO:0000313|EMBL:GAH90341.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR1-18-Sp65_coassembly_scaffold_153298_10
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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12470..15820
DNA (3351bp) protein (1117aa)
RHS repeat-associated core domain protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q2I3_9CYAN
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFY39930.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
SR1-18-Sp65_coassembly_scaffold_153298_11
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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16191..17012
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P3W8_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ81854.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
SR1-18-Sp65_coassembly_scaffold_153298_12
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

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17037..17453
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035CEC2F
hypothetical protein
Tax=CG_Mariprof_04
SR1-18-Sp65_coassembly_scaffold_153298_13

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17455..18207
DNA (753bp) protein (251aa)
GCN5-related protein N-acetyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYA6_BEUC1
Marine sediment metagenome DNA, contig: S12H4_S12593 {ECO:0000313|EMBL:GAJ11442.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
N-acetyltransferase GCN5
SR1-18-Sp65_coassembly_scaffold_153298_14
unknown

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18319..18627
DNA (309bp) protein (103aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_153298_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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18817..19422
DNA (606bp) protein (202aa)
Crp/FNR family transcriptional regulator id=1247608 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Crp/Fnr family transcriptional regulator
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_153298_16
unknown

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comp(19425..19760)
DNA (336bp) protein (112aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_153298_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

19805..21109
DNA (1305bp) protein (435aa)
major facilitator superfamily protein id=1247614 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
major facilitator superfamily protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_153298_18
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21283..21582
DNA (300bp) protein (100aa)
Pentapeptide MXKDX repeat protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESE6_METSB
pentapeptide MXKDX repeat-containing protein
Pentapeptide MXKDX repeat protein {ECO:0000313|EMBL:ACK49836.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SR1-18-Sp65_coassembly_scaffold_153298_19
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

21640..22419
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. C RepID=D9VJJ8_9ACTO id=1247606 bin=RBG9 species=Streptomyces sp. C genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
Sensor histidine kinase
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
SR1-18-Sp65_coassembly_scaffold_153298_20
unknown

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22500..22634
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 20 items

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