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SR1-18-Sp65_coassembly_scaffold_148273

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_148273_1
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..555
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DNZ4_DESRL
Uncharacterized protein {ECO:0000313|EMBL:KJS15418.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_148273_2
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

670..1158
DNA (489bp) protein (163aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGK0_9CHLR
moaC; molybdenum cofactor biosynthesis protein MoaC
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_148273_3
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

1163..1408
DNA (246bp) protein (82aa)
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_148273_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1405..1887
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00031C65FC
putative nucleic acid-binding protein, contains PIN domain
Tax=GWC2_Rokubacteria_70_16_curated
SR1-18-Sp65_coassembly_scaffold_148273_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1884..2723
DNA (840bp) protein (280aa)
aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21] id=24657392 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
aminotransferase
Aminotransferase, class IV superfamily {ECO:0000313|EMBL:ABC43848.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
SR1-18-Sp65_coassembly_scaffold_148273_6
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

2793..3038
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002EC512D
Uncharacterized protein {ECO:0000313|EMBL:KIY10246.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_148273_7
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

3035..3199
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0003002360
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY87830.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
SR1-18-Sp65_coassembly_scaffold_148273_8
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3172..4053
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037B20A3
Phenazine biosynthesis protein {ECO:0000313|EMBL:KGF72552.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
PhzF family phenazine biosynthesis protein
SR1-18-Sp65_coassembly_scaffold_148273_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

4153..4428
DNA (276bp) protein (92aa)
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_148273_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

4565..5542
DNA (978bp) protein (326aa)
selD; selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3G3_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_148273_11
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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5576..6835
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000371503A
fabF; 3-oxoacyl-ACP synthase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_148273_12
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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6825..7604
DNA (780bp) protein (260aa)
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ86_9FIRM id=1241128 bin=RBG2 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_148273_13
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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7615..8487
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IB15_9CHLR
dTDP-4-dehydrorhamnose reductase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_148273_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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8589..11450
DNA (2862bp) protein (954aa)
UvrABC system protein A n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C488_SPHTD
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SR1-18-Sp65_coassembly_scaffold_148273_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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11912..12970
DNA (1059bp) protein (353aa)
Putative ABC transporter substrate binding protein id=4826857 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC-type transporter, periplasmic subunit
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_148273_16
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

12967..14070
DNA (1104bp) protein (368aa)
ABC-type cobalamin/Fe3+ siderophore transport system, permease component n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BHD8_DEHSV
fepD; cobalamin/Fe3+ siderophore ABC transporter permease
Tax=RBG_13_Chloroflexi_46_14_curated
SR1-18-Sp65_coassembly_scaffold_148273_17

Not on your lists

14067..14852
DNA (786bp) protein (262aa)
ABC-type cobalamin/Fe3+-siderophores transport system, ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=1242507 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S06H3_C03605 {ECO:0000313|EMBL:GAI09284.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative iron compound ABC transporter ATP binding protein
SR1-18-Sp65_coassembly_scaffold_148273_18
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14854..15381
DNA (528bp) protein (176aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IH27_9CHLR
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EFO79502.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
SR1-18-Sp65_coassembly_scaffold_148273_19
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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15383..16789
DNA (1407bp) protein (469aa)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7Z1_CHLAD
cobyrinic acid a,c-diamide synthase
Cobyrinic acid A,C-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SR1-18-Sp65_coassembly_scaffold_148273_20
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16818..17879
DNA (1062bp) protein (354aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGG4_9CHLR
SR1-18-Sp65_coassembly_scaffold_148273_21
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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17924..19003
DNA (1080bp) protein (360aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4D0_9CHLR
cobalamin biosynthesis protein CobD
Tax=RBG_16_Chloroflexi_56_11_curated
SR1-18-Sp65_coassembly_scaffold_148273_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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19083..20144
DNA (1062bp) protein (354aa)
Cobyric acid synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I587_CALAS
Uncharacterized protein {ECO:0000313|EMBL:ETW95551.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cobQ; cobyric acid synthase
SR1-18-Sp65_coassembly_scaffold_148273_23
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

20141..20761
DNA (621bp) protein (207aa)
gpmB; phosphoglycerate mutase GpmB (EC:5.4.2.1)
Phosphoglycerate mutase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEJ3_9CHLR
Phosphoglycerate mutase {ECO:0000313|EMBL:EFO80385.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
SR1-18-Sp65_coassembly_scaffold_148273_24
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

20758..22269
DNA (1512bp) protein (504aa)
cobQ; cobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QCH0_9CHLR
Tax=RBG_16_Chloroflexi_51_9_curated
SR1-18-Sp65_coassembly_scaffold_148273_25
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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22266..22976
DNA (711bp) protein (237aa)
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYB0_RUBXD
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_148273_26
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

22983..23750
DNA (768bp) protein (256aa)
xylose isomerase n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B48722
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_148273_27
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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23729..24319
DNA (591bp) protein (197aa)
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I299_CALAS
cobP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_148273_28
unknown

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24826..25404
DNA (579bp) protein (193aa)

This feature has no annotations

Displaying 28 items

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