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SR1-18-Sp65_coassembly_scaffold_130048

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_130048_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

295..1209
DNA (915bp) protein (305aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK45_KORVE
HsdR family type I site-specific deoxyribonuclease
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_130048_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1222..3369
DNA (2148bp) protein (716aa)
DEAD/DEAH box helicase n=1 Tax=Meiothermus timidus RepID=UPI00036F5E4D
type I site-specific deoxyribonuclease, HsdR family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SR1-18-Sp65_coassembly_scaffold_130048_trna_1
unknown

Not on your lists

comp(3517..3590)
DNA (74bp)
transferRNA Asp
SR1-18-Sp65_coassembly_scaffold_130048_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3756..5777)
DNA (2022bp) protein (674aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_130048_4
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6288..8324)
DNA (2037bp) protein (679aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_130048_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8840..10804)
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Geovibrio thiophilus RepID=UPI0003B5226F
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_130048_6
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

11296..12447
DNA (1152bp) protein (384aa)
atm:ANT_15960 dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1); K01129 dGTPase [EC:3.1.5.1] id=1246569 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SR1-18-Sp65_coassembly_scaffold_130048_7

Not on your lists

12862..13104
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JER6_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37024.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_130048_8
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

13189..16134
DNA (2946bp) protein (982aa)
SMC domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2Q5_DICTD
SMC domain-containing protein
SMC domain protein {ECO:0000313|EMBL:ACK42899.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
SR1-18-Sp65_coassembly_scaffold_130048_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16131..17678)
DNA (1548bp) protein (516aa)
AMP-dependent synthetase and ligase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V240_ROSS1
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KFE68327.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
AMP-dependent synthetase and ligase
SR1-18-Sp65_coassembly_scaffold_130048_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17776..18483)
DNA (708bp) protein (236aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=2274800 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SR1-18-Sp65_coassembly_scaffold_130048_11
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18548..20419)
DNA (1872bp) protein (624aa)
ABC transporter ATP-binding protein/permease (EC:3.6.1.3)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI00036CDFBA
Uncharacterized protein {ECO:0000313|EMBL:KGF30105.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;"
SR1-18-Sp65_coassembly_scaffold_130048_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20480..21358)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000380E7A3
branched-chain amino acid ABC-type transport system, permease component
Tax=BJP_IG2069_Desfulfarculales_53_13
SR1-18-Sp65_coassembly_scaffold_130048_13
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21493..22737)
DNA (1245bp) protein (415aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCI4_DESTA
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AFM27275.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SR1-18-Sp65_coassembly_scaffold_130048_14
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(22950..23960)
DNA (1011bp) protein (337aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQS0_9CHLR
Tax=RBG_13_Chloroflexi_54_9_curated
SR1-18-Sp65_coassembly_scaffold_130048_15
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(23953..24660)
DNA (708bp) protein (236aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B6ED0F
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130048_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(24723..25145)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Y7_9CLOT
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130048_17
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

25242..25706
DNA (465bp) protein (155aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=14425400 bin=bin1_lowGC species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
Ribose 5-phosphate isomerase (EC:5.3.1.6)
Tax=RBG_13_Chloroflexi_66_10_curated
SR1-18-Sp65_coassembly_scaffold_130048_18
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25793..26329
DNA (537bp) protein (179aa)
Appr-1-p histone processing protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUU1_SYNAS
appr-1-p histone processing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
SR1-18-Sp65_coassembly_scaffold_130048_19
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


26380..27714
DNA (1335bp) protein (445aa)
Signal recognition particle protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I986_CALAS
ffh; signal recognition particle protein
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_130048_20
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists


27805..28182
DNA (378bp) protein (126aa)
30S ribosomal protein S16 n=1 Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=RS16_COPPD
rpsP; 30S ribosomal protein S16
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130048_21
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

28262..28495
DNA (234bp) protein (78aa)
UPF0109 protein Spica_0488 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZZ9_SPICH
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130048_22
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

28546..29019
DNA (474bp) protein (158aa)
Ribosome maturation factor RimM n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN73_9FIRM
rimM; 16S rRNA-processing protein RimM
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130048_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

29135..30247
DNA (1113bp) protein (371aa)
cap:CLDAP_39650 putative DNA processing protein; K04096 DNA processing protein id=1246563 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
DNA protecting protein DprA
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_130048_24
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

30336..31427
DNA (1092bp) protein (364aa)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2A1_HERA2
mannose-1-phosphate guanylyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_130048_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

31495..32064
DNA (570bp) protein (190aa)
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_130048_26
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

32071..32439
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXQ4_METFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP77086.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
SR1-18-Sp65_coassembly_scaffold_130048_27
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

32476..32613
DNA (138bp) protein (46aa)
Putative alkyl hydroperoxide reductase id=3080820 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Thiol-specific antioxidant protein
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_130048_28
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

32707..33219
DNA (513bp) protein (171aa)
Putative alkyl hydroperoxide reductase id=2120324 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
putative alkyl hydroperoxide reductase
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_130048_29
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

33240..34238
DNA (999bp) protein (333aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXS7_ISOPI
D12 class N6 adenine-specific DNA methyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
Displaying items 1-30 of 47 in total

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