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SR1-18-Sp65_coassembly_scaffold_23370

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_23370_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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246..1142
DNA (897bp) protein (299aa)
asparaginase (EC:3.5.1.1)
Asparaginase {ECO:0000313|EMBL:ABQ88544.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABQ88544.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Asparaginase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPJ1_ROSS1
SR1-18-Sp65_coassembly_scaffold_23370_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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1352..2632
DNA (1281bp) protein (427aa)
RNA polymerase sigma factor SigA n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0K0_CALAS
putative RNA polymerase sigma factor
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_23370_3
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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2717..3415
DNA (699bp) protein (233aa)
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_23370_4
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(3701..5179)
DNA (1479bp) protein (493aa)
atm:ANT_28730 two-component sensor histidine kinase id=1246321 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative two-component histidine kinase
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_23370_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(5256..5930)
DNA (675bp) protein (225aa)
atm:ANT_28720 OmpR family two-component response regulator id=1246322 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative OmpR family two-component response regulator
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_23370_6

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comp(5967..6782)
DNA (816bp) protein (272aa)
Predicted protein n=1 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) RepID=A5DGW9_PICGU
Marine sediment metagenome DNA, contig: S01H1_L00604 {ECO:0000313|EMBL:GAF85125.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative cell surface protein
SR1-18-Sp65_coassembly_scaffold_23370_7
Streptomyces sp. SPB74, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6892..7248)
DNA (357bp) protein (119aa)
Putative DNA-binding protein n=1 Tax=Streptomyces sp. Tu6071 RepID=F3ZJ97_9ACTO
DNA-binding protein {ECO:0000313|EMBL:EDY45679.2}; TaxID=465543 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB74).;"
TraR/DksA family transcriptional regulator
SR1-18-Sp65_coassembly_scaffold_23370_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(7326..8462)
DNA (1137bp) protein (379aa)
putative D-alanine--D-alanine ligase (EC:6.3.2.4)
Putative D-alanine--D-alanine ligase id=1761496 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_23370_9
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8463..9959)
DNA (1497bp) protein (499aa)
L-lysine 2,3-aminomutase (EC:5.4.3.2)
L-lysine 2,3-aminomutase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8D7Y5_9BACL
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:EMT52374.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
SR1-18-Sp65_coassembly_scaffold_23370_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(10135..10812)
DNA (678bp) protein (226aa)
TrkA-N domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4B2_SPHTD
TrkA-N domain-containing protein
Tax=RBG_16_Chloroflexi_64_32_curated
SR1-18-Sp65_coassembly_scaffold_23370_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(10927..11460)
DNA (534bp) protein (178aa)
TrkA-N domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMK5_9CHLR
TrkA-N domain protein {ECO:0000313|EMBL:EFH87005.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
K+ transport systems, NAD-binding component
SR1-18-Sp65_coassembly_scaffold_23370_12

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comp(11626..12078)
DNA (453bp) protein (151aa)
UspA domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FP82_DEHSB
Marine sediment metagenome DNA, contig: S03H2_S19567 {ECO:0000313|EMBL:GAH86851.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
UspA domain-containing protein
SR1-18-Sp65_coassembly_scaffold_23370_13
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(12094..12930)
DNA (837bp) protein (279aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3K4_ANATU
Tax=CG_Anaero_03
SR1-18-Sp65_coassembly_scaffold_23370_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(12985..13626)
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=3329641 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_23370_15
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13657..14553)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerC n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K100_DEHLB
tyrosine recombinase XerD
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_23370_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(14638..15789)
DNA (1152bp) protein (384aa)
Cystathionine gamma-synthase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AV79_HERA2
cystathionine gamma-synthase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_23370_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

15969..16754
DNA (786bp) protein (262aa)
Putative uncharacterized protein id=3950184 bin=GWF2_OP3_38_59 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
protein of unknown function DUF81
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_23370_18
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

17235..18005
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G886_9CYAN
polymorphic outer membrane protein
Tax=RBG_16_Chloroflexi_56_8_curated
Displaying 18 items

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