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SR1-18-Sp65_coassembly_scaffold_195041

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_195041_1
unknown

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comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_195041_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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164..3397
DNA (3234bp) protein (1078aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9U4_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02032.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_195041_3
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3543..4319
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00037575BC
Methyltransferase {ECO:0000313|EMBL:KJY37286.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
methyltransferase
SR1-18-Sp65_coassembly_scaffold_195041_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4496..5272
DNA (777bp) protein (259aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR7_ROSS1
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABQ90370.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_195041_5
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5239..5553
DNA (315bp) protein (105aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
GAF sensor signal transduction histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEG1_9CHLR
putative signal transduction histidine kinase
SR1-18-Sp65_coassembly_scaffold_195041_6
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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5540..6199
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQU7_MARHT
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEB12311.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
SR1-18-Sp65_coassembly_scaffold_195041_7
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6347..8428
DNA (2082bp) protein (694aa)
Thiol-activated cytolysin n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YT40_CAPCC
thiol-activated cytolysin
Thiol-activated cytolysin {ECO:0000313|EMBL:CEN49256.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
SR1-18-Sp65_coassembly_scaffold_195041_8
Colletotrichum gloeosporioides, Colletotrichum, Glomerellales, Hypocreomycetidae, Ascomycota, Fungi

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8490..8924
DNA (435bp) protein (145aa)
Bet v i allergen n=1 Tax=Colletotrichum gloeosporioides (strain Nara gc5) RepID=L2FCX8_COLGN
Bet v i allergen {ECO:0000313|EMBL:ELA23603.1}; TaxID=1213859 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum.;" source="Colletotrichum gloeosporioides (strain Nara gc5) (Anthracnose fungus); (Glomerella cingulata).;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_195041_9
Lotus japonicus, Lotus, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(9412..11040)
DNA (1629bp) protein (543aa)
Putative arabinagalactan protein n=1 Tax=Lotus japonicus RepID=Q84QK1_LOTJA
Putative arabinagalactan protein {ECO:0000313|EMBL:CAD89603.1}; TaxID=34305 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus.;" source="Lotus japonicus (Lotus corniculatus var. japonicus).;"
dihydrolipoamide acetyltransferase
SR1-18-Sp65_coassembly_scaffold_195041_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(11054..11905)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H1W8_9ACTO
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_195041_11
unknown

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comp(11964..12590)
DNA (627bp) protein (209aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_195041_12
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12636..13655)
DNA (1020bp) protein (340aa)
Uncharacterized membrane protein, predicted transporter n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EN71_9CHLR
hypothetical protein
Tax=CG_Anaero_01
SR1-18-Sp65_coassembly_scaffold_195041_13
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13671..14264)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TVA2_9NOCA
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY45993.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
SR1-18-Sp65_coassembly_scaffold_195041_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14269..15180)
DNA (912bp) protein (304aa)
hypothetical protein id=14630957 bin=bin9_gal15 species=Smaragdicoccus niigatensis genus=Smaragdicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
SR1-18-Sp65_coassembly_scaffold_195041_15
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15198..16049)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M366_ARTPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX73287.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
SR1-18-Sp65_coassembly_scaffold_195041_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16120..18501)
DNA (2382bp) protein (794aa)
YVTN family beta-propeller repeat protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KQS4_9SYNC
40-residue YVTN family beta-propeller repeat-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SR1-18-Sp65_coassembly_scaffold_195041_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(18557..19774)
DNA (1218bp) protein (406aa)
blue (type 1) copper domain-containing protein id=14430606 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
copper binding protein of plastocyanin/azurin family
Tax=CSP1_5_NC10
SR1-18-Sp65_coassembly_scaffold_195041_18
unknown

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comp(19884..20060)
DNA (177bp) protein (59aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_195041_19
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(20064..20468)
DNA (405bp) protein (135aa)
LuxR family two component transcriptional regulator n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9UKT5_PAEAL
two component transcriptional regulator, LuxR family
Tax=RBG_13_Chloroflexi_68_17_curated
SR1-18-Sp65_coassembly_scaffold_195041_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(20472..20747)
DNA (276bp) protein (92aa)
hypothetical protein id=7202218 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_195041_21
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20744..23578)
DNA (2835bp) protein (945aa)
Cyclic nucleotide-binding protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IG69_9CHLR
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EFO79803.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
cyclic nucleotide-binding protein
Displaying 21 items

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