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SR1-18-Sp65_coassembly_scaffold_540056

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_540056_1
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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224..2794
DNA (2571bp) protein (857aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJB2_DESK7
3-isopropylmalate dehydratase large subunit
SR1-18-Sp65_coassembly_scaffold_540056_2
unknown

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2931..3122
DNA (192bp) protein (64aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_540056_3
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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3138..3638
DNA (501bp) protein (167aa)
leuD2; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGP0_THEPS
Tax=CG_Anaero_04
SR1-18-Sp65_coassembly_scaffold_540056_4
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3742..4164
DNA (423bp) protein (141aa)
Thioesterase superfamily protein n=1 Tax=Natrinema pellirubrum DSM 15624 RepID=G4GEL0_9EURY id=1247791 bin=RBG9 species=Natrinema pellirubrum genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG9 organism_group=Chloroflexi
acyl-CoA thioester hydrolase, YbgC/YbaW family
Tax=CG_Syntroph_02
SR1-18-Sp65_coassembly_scaffold_540056_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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4209..5264
DNA (1056bp) protein (352aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] id=1250074 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_540056_6
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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5345..6616
DNA (1272bp) protein (424aa)
MFS transporter n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B34762
sugar phosphate permease
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR1-18-Sp65_coassembly_scaffold_540056_7
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6693..7883
DNA (1191bp) protein (397aa)
pepP; protein PepP (EC:3.4.11.9)
PepP n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QL32_DESAH
Tax=RBG_13_Deltaproteobacteria_49_15_curated
SR1-18-Sp65_coassembly_scaffold_540056_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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7898..8383
DNA (486bp) protein (162aa)
Transcriptional regulator, MarR family with acetyltransferase activity n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4S1_9CHLR
Transcriptional regulator, MarR family with acetyltransferase activity {ECO:0000313|EMBL:EFH81501.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
MarR family transcriptional regulator
SR1-18-Sp65_coassembly_scaffold_540056_9
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8380..9294
DNA (915bp) protein (305aa)
Putative permease, DMT superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZX5_9RHIZ
hypothetical protein DUF6
Tax=RBG_16_Deltaproteobacteria_50_11_curated
SR1-18-Sp65_coassembly_scaffold_540056_10
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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9334..10596
DNA (1263bp) protein (421aa)
Putative glycosyl hydrolase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AX13_HERA2
glycosyl hydrolase
Putative glycosyl hydrolase {ECO:0000313|EMBL:ABX04821.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SR1-18-Sp65_coassembly_scaffold_540056_11
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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10906..11493
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K063_STRHJ
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_540056_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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11639..13465
DNA (1827bp) protein (609aa)
Bacteriophytochrome (Light-regulated signal transduction histidine kinase) n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KNH8_9SYNC
sensor histidine kinase, HAMP domain-containing
Tax=RBG_16_Armatimonadetes_67_12_curated
SR1-18-Sp65_coassembly_scaffold_540056_13
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

13676..14284
DNA (609bp) protein (203aa)
formate dehydrogenase-O, major subunit (EC:1.2.1.2)
Formate dehydrogenase-O, major subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5C9_THERP
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_540056_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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14375..16891
DNA (2517bp) protein (839aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF24_THET1
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_540056_15
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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16891..17706
DNA (816bp) protein (272aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=2807743 bin=GWC2_Nitrospirae-rel_56_14 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
4Fe-4S ferredoxin
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_540056_16
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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17791..18696
DNA (906bp) protein (302aa)
Polysulphide reductase NrfD id=2807742 bin=GWC2_Nitrospirae-rel_56_14 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Polysulfide reductase NrfD
Tax=GWC2_Nitrospirae_56_14_curated
SR1-18-Sp65_coassembly_scaffold_540056_17
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18719..20854
DNA (2136bp) protein (712aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XM11_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAF48108.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
thioredoxin domain-containing protein
SR1-18-Sp65_coassembly_scaffold_540056_18
GWF2_WS6_complete_39_15, WS6, Bacteria

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21107..21625
DNA (519bp) protein (173aa)
hypothetical protein id=5099348 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KKR06134.1}; TaxID=1619100 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
3-demethylubiquinone-9 3-methyltransferase
SR1-18-Sp65_coassembly_scaffold_540056_19
unknown

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21645..22226
DNA (582bp) protein (194aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_540056_20
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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22275..22562
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=14633041 bin=bin9_gal15 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Acidobacteria_64_8_curated
SR1-18-Sp65_coassembly_scaffold_540056_21
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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22587..22883
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037F4EB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL27284.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SR1-18-Sp65_coassembly_scaffold_540056_22
unknown

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22961..23257
DNA (297bp) protein (99aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_540056_23
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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23346..24470
DNA (1125bp) protein (375aa)
Mrp n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI0_THERP
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
SR1-18-Sp65_coassembly_scaffold_540056_24
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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24675..25058
DNA (384bp) protein (128aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] id=24439674 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=CSP1_3_Armatimonadetes
SR1-18-Sp65_coassembly_scaffold_540056_25
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

25172..26857
DNA (1686bp) protein (562aa)
FdrA family protein
Bacterial FdrA family protein id=1728446 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_52_11_curated
SR1-18-Sp65_coassembly_scaffold_540056_26
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

26866..27531
DNA (666bp) protein (222aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEU3_ALKOO
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
SR1-18-Sp65_coassembly_scaffold_540056_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

27720..28964
DNA (1245bp) protein (415aa)
atm:ANT_05670 hypothetical protein id=1245292 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_540056_28
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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29038..29817
DNA (780bp) protein (260aa)
Putative polyketide cyclase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN3_THERP
putative polyketide cyclase
Tax=RBG_16_Chloroflexi_51_16_curated
SR1-18-Sp65_coassembly_scaffold_540056_29
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30108..31964
DNA (1857bp) protein (619aa)
Multicopper oxidase type 3 n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NVE3_STRVO
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AEM85696.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
SR1-18-Sp65_coassembly_scaffold_540056_30
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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32291..33457
DNA (1167bp) protein (389aa)
YadA domain-containing protein n=1 Tax=Pectobacterium phage My1 RepID=J9QGS2_9CAUD
cell wall surface anchor family protein
Tax=CG_Anaero_02
Displaying items 1-30 of 42 in total

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