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SR1-18-Sp65_coassembly_scaffold_698224

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_698224_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1548)
DNA (1548bp) protein (516aa)
Extracellular solute-binding protein family 1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Q8_VARPS
extracellular solute-binding protein family 1
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACS22828.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SR1-18-Sp65_coassembly_scaffold_698224_2
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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comp(1625..2587)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003788BF1
transketolase
Tax=Caldatribacterium californiense
SR1-18-Sp65_coassembly_scaffold_698224_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(2574..3491)
DNA (918bp) protein (306aa)
hypothetical protein, partial n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000376777A
transketolase, N-terminal subunit
Tax=RBG_19FT_COMBO_JS1_35_14_curated
SR1-18-Sp65_coassembly_scaffold_698224_4
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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comp(3488..4156)
DNA (669bp) protein (223aa)
Transcriptional regulator, GntR family n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RA44_AMMDK
GntR family transcriptional regulator
Tax=Caldatribacterium californiense
SR1-18-Sp65_coassembly_scaffold_698224_5
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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4466..5164
DNA (699bp) protein (233aa)
Peptidase membrane zinc metallopeptidase putative n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EIB2_CHLL2
peptidase membrane zinc metallopeptidase
Peptidase membrane zinc metallopeptidase putative {ECO:0000313|EMBL:ACD89942.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
SR1-18-Sp65_coassembly_scaffold_698224_6
unknown

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comp(5215..5547)
DNA (333bp) protein (111aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_698224_7

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comp(5557..5976)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ1_MARHT
Marine sediment metagenome DNA, contig: S01H4_C01286 {ECO:0000313|EMBL:GAG66025.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_698224_8
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(6079..6495)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003692314
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SR1-18-Sp65_coassembly_scaffold_698224_9
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(6509..7096)
DNA (588bp) protein (196aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B8J4_HERA2
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ABX07658.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SR1-18-Sp65_coassembly_scaffold_698224_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7133..7345)
DNA (213bp) protein (71aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VU6_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ86219.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR1-18-Sp65_coassembly_scaffold_698224_11
unknown

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7427..7609
DNA (183bp) protein (61aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_698224_12
unknown

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comp(7622..7759)
DNA (138bp) protein (46aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_698224_13
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(8003..8968)
DNA (966bp) protein (322aa)
Putative uncharacterized protein id=1713191 bin=GWB2_Chloroflexi_49_20 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_698224_14
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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9280..12339
DNA (3060bp) protein (1020aa)
rxy:Rxyl_2946 LuxR family transcriptional regulator id=1246161 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
LuxR family transcriptional regulator
Tax=RBG_16_KB1_OP1_55_9_curated
SR1-18-Sp65_coassembly_scaffold_698224_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12524..13129
DNA (606bp) protein (202aa)
Cupin domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XF57_VARPD
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AGU50740.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SR1-18-Sp65_coassembly_scaffold_698224_16
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

13350..15458
DNA (2109bp) protein (703aa)
Adenylate/guanylate cyclase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT
transcriptional activator
Tax=RBG_16_KB1_OP1_55_9_curated
Displaying 16 items

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