ggKbase home page

JSantini_S4_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 43 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_68_1
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(1..597)
DNA (597bp) protein (199aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AR87_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60659.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_2
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(597..866)
DNA (270bp) protein (90aa)
transposase
Transposase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0APH2_FERAC
Transposase {ECO:0000313|EMBL:AGO60771.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_3
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(1445..4558)
DNA (3114bp) protein (1038aa)
hypothetical protein
TVG0913498 protein n=2 Tax=Thermoplasma volcanium RepID=Q97AB4_THEVO
TVG0913498 protein {ECO:0000313|EMBL:BAB60038.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
JSantini_S4_scaffold_68_4
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4634..5404)
DNA (771bp) protein (257aa)
TVG0916684 protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97AB3_THEVO
TVG0916684 protein {ECO:0000313|EMBL:BAB60039.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
JSantini_S4_scaffold_68_5

Not on your lists

5716..6474
DNA (759bp) protein (253aa)
methyltransferase FkbM family
Methyltransferase FkbM domain protein n=3 Tax=mine drainage metagenome RepID=T0YX93_9ZZZZ
Methyltransferase FkbM domain protein {ECO:0000313|EMBL:EQD40231.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S4_scaffold_68_6
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(6566..7627)
DNA (1062bp) protein (354aa)
glycosyltransferase
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97AB2_THEVO
Uncharacterized protein {ECO:0000313|EMBL:BAB60040.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
JSantini_S4_scaffold_68_7
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(7741..8358)
DNA (618bp) protein (206aa)
cell wall biosynthesis glycosyltransferase
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI0003743A08
Dolichol monophosphate mannose synthase {ECO:0000313|EMBL:BAB60044.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
JSantini_S4_scaffold_68_8
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8517..9296)
DNA (780bp) protein (260aa)
Alpha-D-glucoside glucohydrolase 1
Alpha-D-glucoside glucohydrolase 1 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AU56_FERAC
Alpha-D-glucoside glucohydrolase 1 {ECO:0000313|EMBL:AGO61925.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_9
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9431..10516)
DNA (1086bp) protein (362aa)
mannosyltransferase B
Mannosyltransferase B n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LZ82_9EURY
Mannosyltransferase B {ECO:0000313|EMBL:EQB69924.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.;"
JSantini_S4_scaffold_68_10
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10656..11573
DNA (918bp) protein (306aa)
cell wall biosynthesis glycosyltransferase
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97AD4_THEVO
Uncharacterized protein {ECO:0000313|EMBL:BAB60018.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
JSantini_S4_scaffold_68_11
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11642..12673
DNA (1032bp) protein (344aa)
mannosyltransferase B
Mannosyltransferase B n=1 Tax=Ferroplasma sp. Type II RepID=T0M5V9_9EURY
Mannosyltransferase B {ECO:0000313|EMBL:EQB71738.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_68_12
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

12718..14352
DNA (1635bp) protein (545aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97AA6_THEVO
Uncharacterized protein {ECO:0000313|EMBL:BAB60046.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
JSantini_S4_scaffold_68_13
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14399..16114)
DNA (1716bp) protein (572aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AU61_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61914.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_14
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16282..16821
DNA (540bp) protein (180aa)
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ASG4_FERAC
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AGO61921.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_15
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(16818..17801)
DNA (984bp) protein (328aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AU54_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61920.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_16
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17821..18657)
DNA (837bp) protein (279aa)
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AU62_FERAC
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AGO61919.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_17
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

18750..19805
DNA (1056bp) protein (352aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARR8_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61918.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_18
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

20254..20469
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1A7B7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AJW71751.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
JSantini_S4_scaffold_68_19
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

20444..21628
DNA (1185bp) protein (395aa)
UBA/THIF-type NAD/FAD binding fold protein
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0003038BCD
Tax=RBG_16_Zixibacteria_53_22_curated
JSantini_S4_scaffold_68_20

Not on your lists

21612..22004
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1D8B9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD77659.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S4_scaffold_68_21
unknown

Not on your lists

22123..22275
DNA (153bp) protein (51aa)

This feature has no annotations

JSantini_S4_scaffold_68_22
unknown

Not on your lists

22312..22800
DNA (489bp) protein (163aa)

This feature has no annotations

JSantini_S4_scaffold_68_23
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(22806..23192)
DNA (387bp) protein (129aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LKS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65139.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
JSantini_S4_scaffold_68_24
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

24285..25796
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M9S8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72898.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_68_25
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

26473..26682
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AU50_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61910.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_26
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

26702..27688
DNA (987bp) protein (329aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AU59_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61909.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_27
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

28183..28812
DNA (630bp) protein (210aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ASF5_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61911.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_68_28
unknown

Not on your lists

28991..29815
DNA (825bp) protein (275aa)
hypothetical protein
hypothetical protein TVN0683 n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=UPI0000164DAE
JSantini_S4_scaffold_68_29
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

30228..30545
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0LT68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67834.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_68_30
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

30581..31369
DNA (789bp) protein (263aa)
IS66 family element, transposase
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0LT68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67834.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
Displaying items 1-30 of 43 in total

View Taxonomy